RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 KCTD9Q7L273 389 aa9.54□□□□□ -0.88
LINC00562-201ENST00000566385 CD177Q8N6Q3 437 aa9.54□□□□□ -0.88
LINC00562-201ENST00000566385 MITD1Q8WV92 249 aa9.54□□□□□ -0.88
LINC00562-201ENST00000566385 SEC22AQ96IW7 307 aa9.54□□□□□ -0.88
LINC00562-201ENST00000566385 GPHA2Q96T91 129 aa9.54□□□□□ -0.88
LINC00562-201ENST00000566385 GCM1Q9NP62 436 aa9.54□□□□□ -0.88
LINC00562-201ENST00000566385 OPN4Q9UHM6 478 aa9.54□□□□□ -0.88
LINC00562-201ENST00000566385 MGAT4AQ9UM21 535 aa9.54□□□□□ -0.88
LINC00562-201ENST00000566385 UTP20O75691 2785 aaKnown RBP9.53□□□□□ -0.88
LINC00562-201ENST00000566385 SRRM5B3KS81 715 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 DNASE1P24855 282 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 ERP29P30040 261 aaKnown RBP9.53□□□□□ -0.88
LINC00562-201ENST00000566385 SELENOVP59797 346 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 NCMAPQ5T1S8 102 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 FAHD2BQ6P2I3 314 aaPredicted RBP9.53□□□□□ -0.88
LINC00562-201ENST00000566385 Q6ZS49 121 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 LDLRAD3Q86YD5 345 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 OR11L1Q8NGX0 322 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 FAHD2AQ96GK7 314 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 ARFGEF3Q5TH69 2177 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 IGKV1D-17A0A075B6S4 117 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 MPTX1A8MV57 137 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 TRDCB7Z8K6 153 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 E7EQL1 145 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 DUS4LO95620 317 aaKnown RBP9.53□□□□□ -0.88
LINC00562-201ENST00000566385 PSG2P11465 335 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 PPP3CBP16298 524 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 LMO1P25800 156 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 TNFAIP6P98066 277 aaPredicted RBP9.53□□□□□ -0.88
LINC00562-201ENST00000566385 COL10A1Q03692 680 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 ANKRD55Q3KP44 614 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 FBXL19-AS1Q494R0 122 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 FAM53AQ6NSI3 398 aaPredicted RBP9.53□□□□□ -0.88
LINC00562-201ENST00000566385 ZNF880Q6PDB4 577 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 IL1F10Q8WWZ1 152 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 RNASE6Q93091 150 aaKnown RBP9.53□□□□□ -0.88
LINC00562-201ENST00000566385 KIRREL1Q96J84 757 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 SHARPINQ9H0F6 387 aa9.53□□□□□ -0.88
LINC00562-201ENST00000566385 IGKV1D-13A0A0B4J2D9 117 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 ADAP1O75689 374 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 CYB5R3P00387 301 aaPredicted RBP9.52□□□□□ -0.89
LINC00562-201ENST00000566385 LHBP01229 141 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 PPYP01298 95 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 GIPP09681 153 aaPredicted RBP9.52□□□□□ -0.89
LINC00562-201ENST00000566385 IGKV1-13P0DP09 117 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 PHLDA2Q53GA4 152 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 ZBTB8BQ8NAP8 495 aaPredicted RBP9.52□□□□□ -0.89
LINC00562-201ENST00000566385 COQ2Q96H96 371 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 HYLS1Q96M11 299 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.89
LINC00562-201ENST00000566385 TRAPPC2LQ9UL33 140 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 HCFC1P51610 2035 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 EPG5Q9HCE0 2579 aa9.52□□□□□ -0.89
LINC00562-201ENST00000566385 TMEM8BA6NDV4 472 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 GLAP06280 429 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 ZNF728P0DKX0 622 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 PIGPP57054 158 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 TFF3Q07654 80 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 SRSF7Q16629 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 SMIM21Q3B7S5 101 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 SP6Q3SY56 376 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 FAM219AQ8IW50 185 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 GAPTQ8N292 157 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 C9orf62Q8N4C0 152 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 ASCC1Q8N9N2 400 aaKnown RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 ZNRF1Q8ND25 227 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 MOB3AQ96BX8 217 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 PHB2Q99623 299 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 TMEM246Q9BRR3 403 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 ESRP2Q9H6T0 727 aaKnown RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 OR1A1Q9P1Q5 309 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 HSPB11Q9Y547 144 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 RAI1Q7Z5J4 1906 aaPredicted RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 TRBV6-6A0A0A6YYG2 114 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 A0A1B0GW55 424 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DBX1A6NMT0 343 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 SFT2D2O95562 160 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DUX4L2P0CJ85 424 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DUX4L3P0CJ86 424 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DUX4L4P0CJ87 422 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DUX4L5P0CJ88 424 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DUX4L6P0CJ89 424 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DUX4L7P0CJ90 424 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 SELLP14151 372 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 PRDX2P32119 198 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 CFHR2P36980 270 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 OR3A1P47881 315 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 GLIPR1P48060 266 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 SURF2Q15527 256 aaPredicted RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DUX4L9Q6RFH8 374 aaPredicted RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 OR5M8Q8NGP6 311 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 ZFAND1Q8TCF1 268 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 PARP12Q9H0J9 701 aaKnown RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 RIMS4Q9H426 269 aaPredicted RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 RANBP3Q9H6Z4 567 aaPredicted RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 DUX4Q9UBX2 424 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 KIF25Q9UIL4 384 aa9.51□□□□□ -0.89
LINC00562-201ENST00000566385 ERRFI1Q9UJM3 462 aaPredicted RBP9.51□□□□□ -0.89
LINC00562-201ENST00000566385 C14orf166Q9Y224 244 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms