RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TNFRSF13CQ96RJ3 184 aa2.56□□□□□ -2
CHD9-218ENST00000566029 NLRC5Q86WI3 1866 aa2.56□□□□□ -2
CHD9-218ENST00000566029 NUP210Q8TEM1 1887 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 FIGNL2A6NMB9 653 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SHISA8B8ZZ34 492 aa2.56□□□□□ -2
CHD9-218ENST00000566029 H0YL77 283 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SLC37A1P57057 533 aa2.56□□□□□ -2
CHD9-218ENST00000566029 MRPS21P82921 87 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 ASTLQ6HA08 431 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 H2BFWTQ7Z2G1 175 aa2.56□□□□□ -2
CHD9-218ENST00000566029 PIGCQ92535 297 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SCARF2Q96GP6 870 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 CABLES2Q9BTV7 478 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CD300LBA8K4G0 201 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SAP18O00422 153 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 GPR137BO60478 399 aa2.56□□□□□ -2
CHD9-218ENST00000566029 FAM87AP0C7U9 286 aa2.56□□□□□ -2
CHD9-218ENST00000566029 KLK2P20151 261 aa2.56□□□□□ -2
CHD9-218ENST00000566029 KIR2DS2P43631 304 aa2.56□□□□□ -2
CHD9-218ENST00000566029 PHYHD1Q5SRE7 291 aa2.56□□□□□ -2
CHD9-218ENST00000566029 OR4C11Q6IEV9 310 aa2.56□□□□□ -2
CHD9-218ENST00000566029 LSRQ86X29 649 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 OR8I2Q8N0Y5 310 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF563Q8TA94 476 aa2.56□□□□□ -2
CHD9-218ENST00000566029 FAM46BQ96A09 425 aa2.56□□□□□ -2
CHD9-218ENST00000566029 MOB3AQ96BX8 217 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SPACA9Q96E40 222 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 C19orf24Q9BVV8 132 aa2.56□□□□□ -2
CHD9-218ENST00000566029 KIR3DX1Q9H7L2 352 aa2.56□□□□□ -2
CHD9-218ENST00000566029 NAGKQ9UJ70 344 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF443Q9Y2A4 671 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 H3BQ15 152 aa2.56□□□□□ -2
CHD9-218ENST00000566029 LILRA1O75019 489 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZFPL1O95159 310 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CT45A8P0DMV1 189 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CT45A9P0DMV2 189 aa2.56□□□□□ -2
CHD9-218ENST00000566029 MDKP21741 143 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 RPS4Y1P22090 263 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 OR10J1P30954 320 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ID1P41134 155 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TMEM249Q2WGJ8 235 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CT45A2Q5DJT8 189 aa2.56□□□□□ -2
CHD9-218ENST00000566029 DMRTC1Q5HYR2 192 aa2.56□□□□□ -2
CHD9-218ENST00000566029 LHFPL1Q86WI0 220 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ORAOV1Q8WV07 137 aa2.56□□□□□ -2
CHD9-218ENST00000566029 OVOL2Q9BRP0 275 aa2.56□□□□□ -2
CHD9-218ENST00000566029 METTL7AQ9H8H3 244 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CLDN7O95471 211 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GYPAP02724 150 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CSNK2A2P19784 350 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 TNFSF10P50591 281 aa2.56□□□□□ -2
CHD9-218ENST00000566029 MYBPHQ13203 477 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TMEM177Q53S58 311 aa2.56□□□□□ -2
CHD9-218ENST00000566029 KIRREL2Q6UWL6 708 aa2.56□□□□□ -2
CHD9-218ENST00000566029 RBMXL3Q8N7X1 1067 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 ASB5Q8WWX0 329 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TVP23CQ96ET8 276 aa2.56□□□□□ -2
CHD9-218ENST00000566029 AMELYQ99218 206 aa2.56□□□□□ -2
CHD9-218ENST00000566029 PRRT1Q99946 306 aa2.56□□□□□ -2
CHD9-218ENST00000566029 LINC00467Q9BRT7 94 aa2.56□□□□□ -2
CHD9-218ENST00000566029 B4DEV8 164 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF736B4DX44 427 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 PLPP1O14494 284 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CD99P14209 185 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SRMP19623 302 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CCR5P51681 352 aa2.56□□□□□ -2
CHD9-218ENST00000566029 LINC01590Q5TEZ4 76 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ADAD2Q8NCV1 583 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 TMEM255BQ8WV15 326 aa2.56□□□□□ -2
CHD9-218ENST00000566029 MRPL24Q96A35 216 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 SIGMAR1Q99720 223 aa2.56□□□□□ -2
CHD9-218ENST00000566029 AICDAQ9GZX7 198 aa2.56□□□□□ -2
CHD9-218ENST00000566029 YAE1D1Q9NRH1 226 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SLC17A4Q9Y2C5 497 aa2.56□□□□□ -2
CHD9-218ENST00000566029 RP1L1Q8IWN7 2480 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 CLDN34H7C241 214 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TRAF3IP2O43734 574 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF728P0DKX0 622 aa2.56□□□□□ -2
CHD9-218ENST00000566029 PNMTP11086 282 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF133P52736 654 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 MANFP55145 182 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF774Q6NX45 483 aa2.56□□□□□ -2
CHD9-218ENST00000566029 RTN4RL2Q86UN3 420 aa2.56□□□□□ -2
CHD9-218ENST00000566029 OR1E3Q8WZA6 343 aa2.56□□□□□ -2
CHD9-218ENST00000566029 AQP3Q92482 292 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SPTSSAQ969W0 71 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF576Q9H609 170 aa2.56□□□□□ -2
CHD9-218ENST00000566029 PROB1E7EW31 1015 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SCGB1C2P0DMR2 95 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SELPP16109 830 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TCN2P20062 427 aa2.56□□□□□ -2
CHD9-218ENST00000566029 AADACP22760 399 aa2.56□□□□□ -2
CHD9-218ENST00000566029 FPR2P25090 351 aa2.56□□□□□ -2
CHD9-218ENST00000566029 KIR2DS3Q14952 304 aa2.56□□□□□ -2
CHD9-218ENST00000566029 LILRA3Q8N6C8 439 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 SLC26A10Q8NG04 563 aa2.56□□□□□ -2
CHD9-218ENST00000566029 MEGF9Q9H1U4 602 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GLIPR2Q9H4G4 154 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TAF9BQ9HBM6 251 aa2.56□□□□□ -2
CHD9-218ENST00000566029 DEC1Q9P2X7 70 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms