RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PLPPR1Q8TBJ4 325 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 RAB39BQ96DA2 213 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 NEIL1Q96FI4 390 aaPredicted RBP10.68□□□□□ -0.7
CLK3-214ENST00000564096 HDHD3Q9BSH5 251 aaPredicted RBP10.68□□□□□ -0.7
CLK3-214ENST00000564096 ST6GALNAC5Q9BVH7 336 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 NCOR1P1Q9H4R4 102 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 ING3Q9NXR8 418 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 KCNIP1Q9NZI2 227 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 OR6C3Q9NZP0 311 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 TENM4Q6N022 2769 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 DYSFO75923 2080 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 TRGV10A0A0A0MS01 117 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 TRBV23-1A0A0A0MS06 115 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 ANKRD20A5PA0PJZ0 165 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 ODAMA1E959 279 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 NAP1L6A6NFF2 107 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 KRTAP10-9P60411 292 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 HLA-DRB3P79483 266 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 AESQ08117 197 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 ASAH1Q13510 395 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 KLF9Q13886 244 aaPredicted RBP10.67□□□□□ -0.7
CLK3-214ENST00000564096 RNASE10Q5GAN6 216 aaKnown RBP10.67□□□□□ -0.7
CLK3-214ENST00000564096 MZT2BQ6NZ67 158 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 Q6ZS49 121 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 ZNF554Q86TJ5 538 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 LYSMD2Q8IV50 215 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 OR5H2Q8NGV7 314 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 MBD6Q96DN6 1003 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 COQ2Q96H96 371 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 BPESC1Q9GZL8 116 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 SHARPINQ9H0F6 387 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 Q9N2K0 584 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 CLN8Q9UBY8 286 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 KIF25Q9UIL4 384 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 ANXA10Q9UJ72 324 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 DSCAMO60469 2012 aa10.67□□□□□ -0.7
CLK3-214ENST00000564096 A0A1B0GW55 424 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 A0A1W2PPH5 198 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 hADV38S2A0JD32 116 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DVL1O14640 695 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 TNFRSF13BO14836 293 aaPredicted RBP10.66□□□□□ -0.7
CLK3-214ENST00000564096 LANCL1O43813 399 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 MT-ND4P03905 459 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 IFNA6P05013 189 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DUX4L2P0CJ85 424 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DUX4L3P0CJ86 424 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DUX4L4P0CJ87 422 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DUX4L5P0CJ88 424 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DUX4L6P0CJ89 424 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DUX4L7P0CJ90 424 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 SELLP14151 372 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 SLC25A16P16260 332 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 NAT1P18440 290 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 HLA-DMAP28067 261 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 OR3A3P47888 321 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 RGS21Q2M5E4 152 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 ESCO2Q56NI9 601 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 HIST2H2BCQ6DN03 193 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 STEAP1BQ6NZ63 245 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DUX4L9Q6RFH8 374 aaPredicted RBP10.66□□□□□ -0.7
CLK3-214ENST00000564096 GVQW1Q8N7I0 195 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 OR4K15Q8NH41 348 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 C10orf105Q8TEF2 133 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 MAFIPQ8WZ33 124 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 H1FXQ92522 213 aaKnown RBP10.66□□□□□ -0.7
CLK3-214ENST00000564096 SNAPC3Q92966 411 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 PATZ1Q9HBE1 687 aaKnown RBP10.66□□□□□ -0.7
CLK3-214ENST00000564096 NECAP2Q9NVZ3 263 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 DUX4Q9UBX2 424 aa10.66□□□□□ -0.7
CLK3-214ENST00000564096 ZNF230Q9UIE0 474 aaPredicted RBP10.66□□□□□ -0.7
CLK3-214ENST00000564096 HRNRQ86YZ3 2850 aaPredicted RBP10.66□□□□□ -0.7
CLK3-214ENST00000564096 DOPEY2Q9Y3R5 2298 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 LINC00854A0A1B0GVQ3 168 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 TRDCB7Z8K6 153 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 DISC1C4P0D8 188 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 FABP7O15540 132 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 SPINT2O43291 252 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 LYRM1O43325 122 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 DIRAS3O95661 229 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 RAB3DO95716 219 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 PTTG1O95997 202 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 CD74P04233 296 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 FCER2P06734 321 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 CTXN2P0C2S0 81 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 HRH1P35367 487 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 GLIPR1P48060 266 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 GNB2P62879 340 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 RPL31P62899 125 aaKnown RBP10.65□□□□□ -0.7
CLK3-214ENST00000564096 MEF2CQ06413 473 aaPredicted RBP10.65□□□□□ -0.7
CLK3-214ENST00000564096 TMEM30BQ3MIR4 351 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 VAX1Q5SQQ9 334 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 OR52W1Q6IF63 320 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 ZNF880Q6PDB4 577 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 LYPD2Q6UXB3 125 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 ZNF565Q8N9K5 539 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 POC5Q8NA72 575 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 OR5AP2Q8NGF4 316 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms