RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 OR12D2P58182 307 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 RPL19P84098 196 aaKnown RBP4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 IL5RAQ01344 420 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 MXD1Q05195 221 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 KIAA0141Q14154 515 aaPredicted RBP4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 TRIQKQ629K1 86 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 DHRS4L2Q6PKH6 230 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 XKRXQ6PP77 449 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 FAM131AQ6UXB0 335 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF788Q6ZQV5 615 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 RNF165Q6ZSG1 346 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 FOXL2NBQ6ZUU3 175 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 CARM1Q86X55 608 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 RDH10Q8IZV5 341 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 LGI3Q8N145 548 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 GAPTQ8N292 157 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 NT5CQ8TCD5 201 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 AGAP11Q8TF27 550 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 PATE1Q8WXA2 126 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 SLC45A3Q96JT2 553 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 PGLYRP3Q96LB9 341 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 ATOH8Q96SQ7 321 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 C6orf62Q9GZU0 229 aaPredicted RBP4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 ARV1Q9H2C2 271 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 MS4A6AQ9H2W1 248 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 MIEF1Q9NQG6 463 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 SMPXQ9UHP9 88 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 RAB26Q9ULW5 256 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 ERGIC3Q9Y282 383 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 C5orf42Q9H799 3197 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 UNC80Q8N2C7 3258 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 IGHV2OR16-5A0A0B4J2B6 119 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 IGHV3-38A0A0C4DH36 116 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 H0YGG7 62 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 K7EQD1 137 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 PLXNA2O75051 1894 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 CA11O75493 328 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 PRSS2P07478 247 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 BPGMP07738 259 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 PSG1P11464 419 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 RAB38P57729 211 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 NUTF2P61970 127 aaKnown RBP4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 PPP1R1AQ13522 171 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 ATP6AP1Q15904 470 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 MAPK14Q16539 360 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 PRSS8Q16651 343 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF678Q5SXM1 525 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 UFSP1Q6NVU6 142 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 SCIMPQ6UWF3 145 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 NPSR1Q6W5P4 371 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 Q6ZPA2 131 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 KNL1Q8NG31 2342 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 OR4K17Q8NGC6 315 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 OR13G1Q8NGZ3 307 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 OR10J5Q8NHC4 309 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 SSC4DQ8WTU2 575 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 POP5Q969H6 163 aaKnown RBP4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF501Q96CX3 271 aaPredicted RBP4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 C9orf85Q96MD7 179 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 OR2A5Q96R48 311 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 PHB2Q99623 299 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 PECRQ9BY49 303 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF391Q9UJN7 358 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 PIEZO1Q92508 2521 aa4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 TDRD6O60522 2096 aaKnown RBP4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 EP300Q09472 2414 aaPredicted RBP4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 GOLGA4Q13439 2230 aaKnown RBP4.12□□□□□ -1.75
VPS35P1-201ENST00000563400 LY6G6EA0A0G2JKS1 128 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 A0A1B0GV72 72 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 IQCMA0A1B0GVH7 501 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 A6NIZ1 184 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 A8MT66 165 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 K7ENP7 123 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 K7EQG2 157 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 CCDC22O60826 627 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ZG16O60844 167 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 SLC22A5O76082 557 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 AIFM1O95831 613 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 IGKV1D-16P01601 117 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 IGLV2-14P01704 120 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 RPL12P30050 165 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PYCR1P32322 319 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 BTCP35070 178 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 GFERP55789 205 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 RAP1BP61224 184 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 SLC35A1P78382 337 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 BTN3A2P78410 334 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PTGES3Q15185 160 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 NSDHLQ15738 373 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 LRRC75BQ2VPJ9 315 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 KLF17Q5JT82 389 aaPredicted RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PXDC1Q5TGL8 231 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF544Q6NX49 715 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 SH2D5Q6ZV89 423 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 TMED4Q7Z7H5 227 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 C4orf33Q8N1A6 199 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 C6orf223Q8N319 242 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PNKDQ8N490 385 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PLPP5Q8NEB5 264 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms