RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 Q6ZS52 159 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 RABEPKQ7Z6M1 372 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SGPP2Q8IWX5 399 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ZNF100Q8IYN0 542 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 LRRC18Q8N456 261 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 TMEM156Q8N614 296 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ZNF283Q8N7M2 679 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SLC38A9Q8NBW4 561 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CLEC18CQ8NCF0 446 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CSNK2A3Q8NEV1 391 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CADM4Q8NFZ8 388 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR9K2Q8NGE7 335 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR4D5Q8NGN0 318 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR2AJ1Q8NGZ0 328 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR8U1Q8NH10 309 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SLC22A8Q8TCC7 542 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 STT3BQ8TCJ2 826 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 LMX1AQ8TE12 382 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 HAS2Q92819 552 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 TMEM54Q969K7 222 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ERGIC1Q969X5 290 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 MRPL24Q96A35 216 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 NABP1Q96AH0 204 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SPSB1Q96BD6 273 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 MOB3AQ96BX8 217 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SPACA9Q96E40 222 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 CPNE2Q96FN4 548 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 FAM71F1Q96KD3 344 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 C18orf12Q96KH6 178 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OXGR1Q96P68 337 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SPACA5Q96QH8 159 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CLCC1Q96S66 551 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CMSS1Q9BQ75 279 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 EMC6Q9BV81 110 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SUCNR1Q9BXA5 334 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 HRH4Q9H3N8 390 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SMDT1Q9H4I9 107 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 BANF2Q9H503 90 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 NAA60Q9H7X0 242 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 METTL8Q9H825 291 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 CERS4Q9HA82 394 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 LMAN1LQ9HAT1 526 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 FGF21Q9NSA1 209 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 FAM212BQ9NTI7 297 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 LUZP4Q9P127 313 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 KIAA1456Q9P272 454 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ANXA10Q9UJ72 324 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 PADI1Q9ULC6 663 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 VDAC3Q9Y277 283 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 RCL1Q9Y2P8 373 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 NSG2Q9Y328 171 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 MTCH2Q9Y6C9 303 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CHCHD2Q9Y6H1 151 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 SMAD5-AS1Q9Y6J3 95 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 MED12Q93074 2177 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 DOCK10Q96BY6 2186 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 KNL1Q8NG31 2342 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 A0A087WWC5 75 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 A0A087WZY1 265 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 LOC102723996A0A087X1L8 192 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 NSG1A0A0A6YYJ2 146 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 IGHV3-20A0A0C4DH32 117 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 TRBV11-1A0A0K0K1C0 115 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 hCG_38984A0A1B0GV85 526 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 A0A1W2PPE3 182 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 A0A1W2PPH5 198 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 C7orf77A4D0Y5 90 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 BTBD17A6NE02 478 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 FAM90A18PA6NE21 464 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 FAM90A16PA6NEW6 464 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 OR6C6A6NF89 314 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 FAM90A20PA6NIJ5 464 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 FAM90A7PA6NKC0 464 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 PCP4L1A6NKN8 68 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 A6NLC8 198 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 FAM90A22PA8MWA6 464 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 FAM90A12PA8MX19 464 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 FAM90A5PA8MXJ8 464 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 FAM90A23PA8MXZ1 464 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 LINC00587B1AMM8 73 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 C2CD4DB7Z1M9 353 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 INAFM1C9JVW0 142 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 NPIPA2E9PIF3 369 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 RPL36A-HNRNPH2H7BZ11 118 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 M0R135 149 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 SDCBPO00560 298 aaPredicted RBP2.09□□□□□ -2.07
SPG11-223ENST00000560858 DHHO43323 396 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 BUB3O43684 328 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 SYNGR3O43761 229 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 RAMP1O60894 148 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 PDCD6O75340 191 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 CLN5O75503 358 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 VAMP5O95183 116 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 CDS2O95674 445 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 IFNA21P01568 189 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 IGHV2-70P01814 119 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 MBPP02686 304 aaPredicted RBP2.09□□□□□ -2.07
SPG11-223ENST00000560858 SERPINA5P05154 406 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 SFTPBP07988 381 aa2.09□□□□□ -2.07
SPG11-223ENST00000560858 HOXB5P09067 269 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms