RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 OR10AC1Q8NH08 325 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR2V2Q96R30 315 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 TMEM204Q9BSN7 226 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 TCRBV16S1A1N1A0A5B0 115 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 C7orf66A4D0T2 115 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 ZNF250P15622 560 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 DRD3P35462 400 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 SRSF9Q13242 221 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 TGIF2LYQ8IUE0 185 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 NFAM1Q8NET5 270 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 CA5BP1Q8WTZ4 195 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 FZR1Q9UM11 496 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 PAGE4O60829 102 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 HOXA6P31267 233 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 RPS4XP62701 263 aaKnown RBP11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 SERF2P84101 59 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 MRPL30Q8TCC3 161 aaKnown RBP11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 ABHD14AQ9BUJ0 271 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 ZNF552Q9H707 407 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 PIPOXQ9P0Z9 390 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 FUT9Q9Y231 359 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 PLCH1Q4KWH8 1693 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 CD1AP06126 327 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 RASL11BQ9BPW5 248 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 FAM60AQ9NP50 221 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 EVPLQ92817 2033 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 CCL2P13500 99 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 NPY1RP25929 384 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 TEPPQ6URK8 271 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR11H7Q8NGC8 314 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR1L8Q8NGR8 309 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 LRRC3BQ96PB8 259 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 VSIG8P0DPA2 414 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 DAOP14920 347 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 HYAL1Q12794 435 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 UBE2V2Q15819 145 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 ASCL5Q7RTU5 278 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 HOGA1Q86XE5 327 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 H1FOOQ8IZA3 346 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 TXNDC17Q9BRA2 123 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 CHST5Q9GZS9 411 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 LHX9Q9NQ69 397 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 RNF7Q9UBF6 113 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 CACNA1SQ13698 1873 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 PHIPQ8WWQ0 1821 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 SUCLG1P53597 346 aaKnown RBP11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 C10orf113Q5VZT2 155 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 C8orf82Q6P1X6 216 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 WDFY1Q8IWB7 410 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR4X1Q8NH49 305 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 SSMEM1Q8WWF3 244 aa11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 FLYWCH2Q96CP2 140 aaKnown RBP11.6□□□□□ -0.55
CSPG4P11-201ENST00000560634 IGHV1OR15-9A0A0B4J2B8 117 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 MEX3AA1L020 520 aaKnown RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 ZNF98A6NK75 572 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 SNURFLB1AK76 121 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 CDIPTO14735 213 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 G6PCP35575 357 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 MRPL54Q6P161 138 aaKnown RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 MYOZ3Q8TDC0 251 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 TMEM210A6NLX4 147 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 HYAL3O43820 417 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 SRSF10O75494 262 aaKnown RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 FAM3BP58499 235 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 C1QL3Q5VWW1 255 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 ZNF880Q6PDB4 577 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 LYPD8Q6UX82 237 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 C16orf47Q6ZP98 133 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 SMIM12Q96EX1 92 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 ZNF665Q9H7R5 613 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 NKX2-6A6NCS4 301 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 KLF7O75840 302 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 HBZP02008 142 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 CD300CQ08708 224 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 TMEM255AQ5JRV8 349 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 TP53RKQ96S44 253 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 RCC2Q9P258 522 aaKnown RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 CDC42EP3Q9UKI2 254 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 TNFSF18Q9UNG2 199 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 RPL36A-HNRNPH2H7BZ11 118 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 M0R296 226 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 TMPRSS2O15393 492 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 TNFSF14O43557 240 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 HOXB3P14651 431 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 LYZL2Q7Z4W2 148 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR8B3Q8NGG8 313 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 GMPPAQ96IJ6 420 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR8B2Q96RD0 313 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 COL25A1Q9BXS0 654 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 MRPL37Q9BZE1 423 aaKnown RBP11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR2H1Q9GZK4 316 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 MS4A5Q9H3V2 200 aa11.59□□□□□ -0.55
CSPG4P11-201ENST00000560634 ZNF25P17030 456 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 PAFAH1B2P68402 229 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 GAB4Q2WGN9 574 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 MRGPRFQ96AM1 343 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 VSIG4Q9Y279 399 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 CCL27Q9Y4X3 112 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms