RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 SPACA1Q9HBV2 294 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 OR1A1Q9P1Q5 309 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 ASH1LQ9NR48 2969 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DYSFO75923 2080 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 C13orf42A0A1B0GVH6 325 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 A0A1B0GW55 424 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 SHISA9B4DS77 424 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 SIAH2O43255 324 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DUX4L2P0CJ85 424 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DUX4L3P0CJ86 424 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DUX4L4P0CJ87 422 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DUX4L5P0CJ88 424 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DUX4L6P0CJ89 424 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DUX4L7P0CJ90 424 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 CD80P33681 288 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 PIGPP57054 158 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 RPS23P62266 143 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 RBM39Q14498 530 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DUX4L9Q6RFH8 374 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 LINC00596Q86U02 117 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 C1orf174Q8IYL3 243 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 ZNRF1Q8ND25 227 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 SECTM1Q8WVN6 248 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 TMEM246Q9BRR3 403 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 GCM1Q9NP62 436 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DNAJB11Q9UBS4 358 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DUX4Q9UBX2 424 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 NPTNQ9Y639 398 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 TACC2O95359 2948 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 IGKV1D-13A0A0B4J2D9 117 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 TRDCB7Z8K6 153 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 E7EQL1 145 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 PPYP01298 95 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 ZNF728P0DKX0 622 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 IGKV1-13P0DP09 117 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 PSG2P11465 335 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 GNLYP22749 145 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 ERP29P30040 261 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 CD200P41217 278 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 EDDM3AQ14507 147 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 ZBTB8BQ8NAP8 495 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 NUP37Q8NFH4 326 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 MITD1Q8WV92 249 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 PHB2Q99623 299 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 PDCD10Q9BUL8 212 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 ESRP2Q9H6T0 727 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 OPN4Q9UHM6 478 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 C14orf166Q9Y224 244 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 IGKV1D-17A0A075B6S4 117 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 TEX13DA0A0J9YY54 714 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 A0A1B0GWJ7 208 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 CEACAM18A8MTB9 384 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 KCNAB3O43448 404 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 TNFSF12O43508 249 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 ZG16O60844 167 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 RPS2P15880 293 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 GLIPR1P48060 266 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 SORDQ00796 357 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 ZNF497Q6ZNH5 498 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 LDLRAD3Q86YD5 345 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 TMEM185AQ8NFB2 350 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 LILRB4Q8NHJ6 448 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 CNTNAP3BQ96NU0 1288 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 CNTNAP3Q9BZ76 1288 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 PARP12Q9H0J9 701 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 KIF25Q9UIL4 384 aa9.13□□□□□ -0.95
SNRPA1-211ENST00000560433 ARFGEF3Q5TH69 2177 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 SRRM5B3KS81 715 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 PRSS44E7EML9 344 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 HSD17B6O14756 317 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 SFT2D2O95562 160 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 HOXB5P09067 269 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 PRDX2P32119 198 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 GLP1RP43220 463 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 TLE1Q04724 770 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 SMIM21Q3B7S5 101 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 NCMAPQ5T1S8 102 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 FIP1L1Q6UN15 594 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 C9orf62Q8N4C0 152 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 RFESDQ8TAC1 157 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 MRGPRDQ8TDS7 321 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 HYLS1Q96M11 299 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 SHARPINQ9H0F6 387 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 MYOZ1Q9NP98 299 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 C5orf51A6NDU8 294 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 TMEM8BA6NDV4 472 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 TUBAL3A6NHL2 446 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 OR2A4O95047 310 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 DUS4LO95620 317 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 TK1P04183 234 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 GIPP09681 153 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 PPP3CBP16298 524 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 HERV-K104P61576 105 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 DHODHQ02127 395 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 FLNCQ14315 2725 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 LTC4SQ16873 150 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 LGALSLQ3ZCW2 172 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 ABCA11PQ4W5N1 156 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms