RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 NHLRC2Q8NBF2 726 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 RSRP1Q9BUV0 290 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 NKX6-2Q9C056 277 aaPredicted RBP11.82□□□□□ -0.52
TRAF3-208ENST00000560371 FFAR1O14842 300 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 GVQW1Q8N7I0 195 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 PIPOXQ9P0Z9 390 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 PRR19A6NJB7 356 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 TMEM210A6NLX4 147 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 PRSS44E7EML9 344 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 LYZP61626 148 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 CCDC144NLQ6NUI1 221 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 GLDNQ6ZMI3 551 aaPredicted RBP11.81□□□□□ -0.52
TRAF3-208ENST00000560371 OR4D11Q8NGI4 311 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 OR1B1Q8NGR6 318 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 OR10AC1Q8NH08 325 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 DYNLRB2Q8TF09 96 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 ZNF385AQ96PM9 386 aaKnown RBP11.81□□□□□ -0.52
TRAF3-208ENST00000560371 GPR137Q96N19 417 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 SH2D2AQ9NP31 389 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 SLC25A10Q9UBX3 287 aaPredicted RBP11.81□□□□□ -0.52
TRAF3-208ENST00000560371 ACP1P24666 158 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 PPP1R1AQ13522 171 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 FAHD2BQ6P2I3 314 aaPredicted RBP11.81□□□□□ -0.52
TRAF3-208ENST00000560371 ADIPOR1Q96A54 375 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 FAHD2AQ96GK7 314 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 A0A0J9YW62 118 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 C9orf170A2RU37 121 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 ADAM10O14672 748 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 SLC52A3Q9NQ40 469 aa11.81□□□□□ -0.52
TRAF3-208ENST00000560371 CREBBPQ92793 2442 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 J3QT63 122 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 FCARP24071 287 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 PAFAH1B2P68402 229 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 MPV17LQ2QL34 196 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 ADAMTS17Q8TE56 1095 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 ANXA10Q9UJ72 324 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 SLC45A2Q9UMX9 530 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 DTX4Q9Y2E6 619 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 NTNG2Q96CW9 530 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 HARBI1Q96MB7 349 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 PPIAL4EA0A075B759 164 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 A0A1W2PPQ1 181 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 PPIAL4DF5H284 164 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 PPIAL4FP0DN26 164 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 LIAT1Q6ZQX7 453 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 FLYWCH2Q96CP2 140 aaKnown RBP11.8□□□□□ -0.52
TRAF3-208ENST00000560371 SLIRPQ9GZT3 109 aaKnown RBP11.8□□□□□ -0.52
TRAF3-208ENST00000560371 PPIAL4AQ9Y536 164 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 BCL2L11O43521 198 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 LNP1A1A4G5 178 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 RPS4XP62701 263 aaKnown RBP11.8□□□□□ -0.52
TRAF3-208ENST00000560371 VAMP3Q15836 100 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 NUDT16L1Q9BRJ7 211 aaKnown RBP11.8□□□□□ -0.52
TRAF3-208ENST00000560371 PLAURQ03405 335 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 CCDC190Q86UF4 302 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 OR4A4PQ8NGN8 299 aa11.8□□□□□ -0.52
TRAF3-208ENST00000560371 PTBP3O95758 552 aaKnown RBP11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ADRA2AP08913 450 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 EIF4EBP2Q13542 120 aaPredicted RBP11.79□□□□□ -0.52
TRAF3-208ENST00000560371 C19orf48Q6RUI8 117 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 R3HDM4Q96D70 268 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 STARD10Q9Y365 291 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 LRRK1Q38SD2 2015 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 NAAAQ02083 359 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 TBC1D26Q86UD7 250 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 MGAMO43451 1857 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 C1QAP02745 245 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ADRB1P08588 477 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 KCNMB1Q16558 191 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 DOLPP1Q86YN1 238 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ZNF596Q8TC21 504 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 GPR179Q6PRD1 2367 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 CD200P41217 278 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 AESQ08117 197 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 SLC26A10Q8NG04 563 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 CCL27Q9Y4X3 112 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ATP6V1G2-DDX39BF2Z307 99 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 SOCS1O15524 211 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 NTN1O95631 604 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 USF1P22415 310 aaPredicted RBP11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ACAA2P42765 397 aaKnown RBP11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ZNF680Q8NEM1 530 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ZCCHC14Q8WYQ9 949 aaKnown RBP11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ZNF586Q9NXT0 402 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 PTPRQQ9UMZ3 2332 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 IGKV1-8A0A0C4DH67 115 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 SFT2D2O95562 160 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 CTSSP25774 331 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 SSX1Q16384 188 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 OR2C3Q8N628 320 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 TMEM74BQ9NUR3 256 aa11.79□□□□□ -0.52
TRAF3-208ENST00000560371 ZNF716A6NP11 495 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 UPK3AO75631 287 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
TRAF3-208ENST00000560371 RNF122Q9H9V4 155 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 BMPR1BO00238 502 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 OR8I2Q8N0Y5 310 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 MIDNQ504T8 468 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms