RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 C19orf12Q9NSK7 152 aa11.86□□□□□ -0.51
SMAD6-204ENST00000559931 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
SMAD6-204ENST00000559931 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
SMAD6-204ENST00000559931 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
SMAD6-204ENST00000559931 AK3Q9UIJ7 227 aa11.86□□□□□ -0.51
SMAD6-204ENST00000559931 TRAPPC2LQ9UL33 140 aa11.86□□□□□ -0.51
SMAD6-204ENST00000559931 DSCAML1Q8TD84 2053 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 ABCA2Q9BZC7 2435 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 TRGV10A0A0A0MS01 117 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 IGHV2-70DA0A0C4DH43 119 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 KIR2DS1A0A191URI9 304 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 FOXI3A8MTJ6 420 aaPredicted RBP11.85□□□□□ -0.51
SMAD6-204ENST00000559931 CA11O75493 328 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 MT-ND4P03905 459 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 LIPFP07098 398 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 HIST1H1DP16402 221 aaKnown RBP11.85□□□□□ -0.51
SMAD6-204ENST00000559931 MEF2CQ06413 473 aaPredicted RBP11.85□□□□□ -0.51
SMAD6-204ENST00000559931 DCAF12L2Q5VW00 463 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 RSBN1Q5VWQ0 802 aaPredicted RBP11.85□□□□□ -0.51
SMAD6-204ENST00000559931 OLFML2AQ68BL7 652 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 FAHD2BQ6P2I3 314 aaPredicted RBP11.85□□□□□ -0.51
SMAD6-204ENST00000559931 LAX1Q8IWV1 398 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 OR4K15Q8NH41 348 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 FAHD2AQ96GK7 314 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 NXF2Q9GZY0 626 aaKnown RBP11.85□□□□□ -0.51
SMAD6-204ENST00000559931 MIXL1Q9H2W2 232 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 OR6C3Q9NZP0 311 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 EXTL2Q9UBQ6 330 aa11.85□□□□□ -0.51
SMAD6-204ENST00000559931 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.519e-6■□□□□ 9.3
SMAD6-204ENST00000559931 TRAV39A0A0B4J263 110 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 A0A0G2JMP0 313 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 A0A0X1KG70 313 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 SERPINE3A8MV23 424 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 GSTP1P09211 210 aaKnown RBP11.84□□□□□ -0.51
SMAD6-204ENST00000559931 ZNF16P17020 682 aaPredicted RBP11.84□□□□□ -0.51
SMAD6-204ENST00000559931 GLP1RP43220 463 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 DVL1P1P54792 670 aaPredicted RBP11.84□□□□□ -0.51
SMAD6-204ENST00000559931 GNG2P59768 71 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 ARF6P62330 175 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 CNIH2Q6PI25 160 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 ZNF497Q6ZNH5 498 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 OR4M2Q8NGB6 313 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 CYYR1Q96J86 154 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 RIMS4Q9H426 269 aaPredicted RBP11.84□□□□□ -0.51
SMAD6-204ENST00000559931 KCNIP1Q9NZI2 227 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 KCNK7Q9Y2U2 307 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
SMAD6-204ENST00000559931 A3GALT2U3KPV4 340 aa11.84□□□□□ -0.51
SMAD6-204ENST00000559931 hCG_1809904A0A1W2PP81 198 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 A0A1W2PPE2 198 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 A0A1W2PR64 198 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 A0A1W2PRV1 198 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 TMEM235A6NFC5 223 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 MFNGO00587 321 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 FOSL1P15407 271 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 TNFSF8P32971 234 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 TAS2R20P59543 309 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 PNLIPRP3Q17RR3 467 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 ZNF260Q3ZCT1 412 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 HACD4Q5VWC8 232 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 C8orf46Q8TAG6 207 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 MRGPRDQ8TDS7 321 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 SMR3AQ99954 134 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 HDHD3Q9BSH5 251 aaPredicted RBP11.83□□□□□ -0.52
SMAD6-204ENST00000559931 NCOR1P1Q9H4R4 102 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 C7orf69Q9H7B7 122 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 AUNIPQ9H7T9 357 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 YAE1D1Q9NRH1 226 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 ELF5Q9UKW6 265 aaPredicted RBP11.83□□□□□ -0.52
SMAD6-204ENST00000559931 UBE2J1Q9Y385 318 aaPredicted RBP11.83□□□□□ -0.52
SMAD6-204ENST00000559931 INSIG2Q9Y5U4 225 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
SMAD6-204ENST00000559931 CLPXO76031 633 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 ZNF728P0DKX0 622 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 CCL3L1P16619 93 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 GZMHP20718 246 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 GATA3P23771 443 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 PITPNAQ00169 270 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 PAX2Q02962 417 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 ZNF273Q14593 569 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 METTL11BQ5VVY1 283 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 SNX29P2Q8IUI4 249 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 LURAP1LQ8IV03 231 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 OR13A1Q8NGR1 328 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 MRPL30Q8TCC3 161 aaKnown RBP11.82□□□□□ -0.52
SMAD6-204ENST00000559931 ZFAND2BQ8WV99 257 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 ZNF714Q96N38 554 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 GAL3ST2Q9H3Q3 398 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 GSX1Q9H4S2 264 aaPredicted RBP11.82□□□□□ -0.52
SMAD6-204ENST00000559931 C12orf4Q9NQ89 552 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 PTTG2Q9NZH5 202 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
SMAD6-204ENST00000559931 FABP12A6NFH5 140 aa11.81□□□□□ -0.52
SMAD6-204ENST00000559931 CD5LO43866 347 aa11.81□□□□□ -0.52
SMAD6-204ENST00000559931 TOX4O94842 621 aa11.81□□□□□ -0.52
SMAD6-204ENST00000559931 PTHLHP12272 177 aa11.81□□□□□ -0.52
SMAD6-204ENST00000559931 RCC1P18754 421 aaPredicted RBP11.81□□□□□ -0.52
SMAD6-204ENST00000559931 PRSS3P35030 304 aa11.81□□□□□ -0.52
SMAD6-204ENST00000559931 PAX5Q02548 391 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms