RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 YPEL4Q96NS1 127 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 RNF157Q96PX1 679 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.35□□□□□ -2.03
SPG11-218ENST00000559754 TAS2R5Q9NYW4 299 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 IL37Q9NZH6 218 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 RBM12B-AS1Q9P1G2 102 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 OPN4Q9UHM6 478 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 FARSAQ9Y285 508 aaKnown RBP2.35□□□□□ -2.03
SPG11-218ENST00000559754 ALG5Q9Y673 324 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 CACNG2Q9Y698 323 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 ZNF780BQ9Y6R6 833 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 MYO5BQ9ULV0 1848 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 NAV1Q8NEY1 1877 aa2.35□□□□□ -2.03
SPG11-218ENST00000559754 IGKV6-21A0A0C4DH24 114 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 IGHV7-4-1A0A0J9YVY3 117 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 TEX50A0A1B0GTY4 177 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 C9JQL5 133 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 H0YJW9 148 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 PANO1I0J062 215 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 KPNA3O00505 521 aaPredicted RBP2.34□□□□□ -2.03
SPG11-218ENST00000559754 TCF21O43680 179 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 ZNF861PO60384 105 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 PLIN3O60664 434 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 CYB5R3P00387 301 aaPredicted RBP2.34□□□□□ -2.03
SPG11-218ENST00000559754 HLA-DRAP01903 254 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 APCSP02743 223 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 TLX1NBP0CAT3 122 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 PRPS1L1P21108 318 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 ADORA1P30542 326 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SULT1A1P50225 295 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SULT1A2P50226 295 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SERPINB9P50453 376 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 H2BFSP57053 126 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 TAS2R43P59537 309 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 ESRRGP62508 458 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SKP2Q13309 424 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 OR2F1Q13607 317 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SNRNP35Q16560 246 aaKnown RBP2.34□□□□□ -2.03
SPG11-218ENST00000559754 SMUG1Q53HV7 270 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 YIF1BQ5BJH7 314 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 FAM78AQ5JUQ0 283 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SCGB1D4Q6XE38 83 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SHISA6Q6ZSJ9 500 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 OLIG3Q7RTU3 272 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 LINC00596Q86U02 117 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 NIT1Q86X76 327 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 ZNF645Q8N7E2 425 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SLC25A29Q8N8R3 303 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 OR4K5Q8NGD3 323 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 OR10D3Q8NH80 312 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 IMP4Q96G21 291 aaKnown RBP2.34□□□□□ -2.03
SPG11-218ENST00000559754 OLFM3Q96PB7 478 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 SELENOSQ9BQE4 189 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 TIPINQ9BVW5 301 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 MROQ9BYG7 248 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 TLNRD1Q9H1K6 362 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 C12orf10Q9HB07 376 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 XPNPEP1Q9NQW7 623 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 C8orf17Q9NRJ1 99 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 PARVAQ9NVD7 372 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 NEU3Q9UQ49 428 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 POLR1DQ9Y2S0 133 aa2.34□□□□□ -2.03
SPG11-218ENST00000559754 FLT4P35916 1363 aa2.34□□□□□ -2.04
SPG11-218ENST00000559754 ZFYVE9O95405 1425 aa2.34□□□□□ -2.04
SPG11-218ENST00000559754 YLPM1P49750 1951 aaKnown RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 CAMSAP1Q5T5Y3 1602 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 E5RI56 91 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 TMEM250H0YL14 139 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 M0QYV0 167 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 MFNGO00587 321 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 ANGPTL7O43827 346 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 FADS1O60427 444 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 SCO1O75880 301 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 IL6P05231 212 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 SOD3P08294 240 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 SCGB1C2P0DMR2 95 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 PSG2P11465 335 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 ALOX5APP20292 161 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 ME2P23368 584 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 IMPA1P29218 277 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 PMELP40967 661 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 TCL1AP56279 114 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 DYNLL1P63167 89 aaKnown RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 LOXL1Q08397 574 aaPredicted RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 C1DQ13901 141 aaKnown RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 EBPQ15125 230 aaKnown RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 ELOCQ15369 112 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 SPA17Q15506 151 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 SNCBQ16143 134 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 GUK1Q16774 197 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 RNASE13Q5GAN3 156 aaKnown RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 ZNF684Q5T5D7 378 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 Q6P435 159 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 ZNF773Q6PK81 442 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 NTM-AS1Q6ZSK4 140 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 RASSF6Q6ZTQ3 369 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 NT5DC3Q86UY8 548 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 COMMD7Q86VX2 200 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 SLC35G3Q8N808 338 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 TMEM161BQ8NDZ6 487 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms