RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 EGR1P18146 543 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 SCGB2B2Q4G0G5 96 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 SPIN3Q5JUX0 258 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 ATPAF1Q5TC12 328 aaPredicted RBP13.84□□□□□ -0.19
TPM1-219ENST00000559397 CD276Q5ZPR3 534 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 Q6ZS49 121 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 LHFPL1Q86WI0 220 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 SUMF2Q8NBJ7 301 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 TERB2Q8NHR7 220 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 LRRC29Q8WV35 223 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 NAV2Q8IVL1 2488 aa13.83□□□□□ -0.19
TPM1-219ENST00000559397 TMEM82A0PJX8 343 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 SRRM5B3KS81 715 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 MCRIP1C9JLW8 97 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 DEGS1O15121 323 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 RLN1P04808 185 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 IRF2P14316 349 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 OR3A3P47888 321 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 CDK10Q15131 360 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 GRK1Q15835 563 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 CHRFAM7AQ494W8 412 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 ZNF525Q8N782 197 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 MED28Q9H204 178 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 PPA2Q9H2U2 334 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 CHODLQ9H9P2 273 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 VSIG4Q9Y279 399 aa13.83□□□□□ -0.2
TPM1-219ENST00000559397 TRBV6-6A0A0A6YYG2 114 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 LRRC30A6NM36 301 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.82□□□□□ -0.2
TPM1-219ENST00000559397 CBX3Q13185 183 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 FCN2Q15485 313 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 FAM201AQ5SY85 155 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 SHEQ5VZ18 495 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 SEC22CQ9BRL7 303 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 DPCDQ9BVM2 203 aaPredicted RBP13.82□□□□□ -0.2
TPM1-219ENST00000559397 GPN1Q9HCN4 374 aaPredicted RBP13.82□□□□□ -0.2
TPM1-219ENST00000559397 EHFQ9NZC4 300 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 FLNBO75369 2602 aaKnown RBP13.82□□□□□ -0.2
TPM1-219ENST00000559397 WNT9BO14905 357 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 RBM39Q14498 530 aaKnown RBP13.82□□□□□ -0.2
TPM1-219ENST00000559397 ZNF626Q68DY1 528 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 ACP7Q6ZNF0 438 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 TMEM17Q86X19 198 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 C1orf87Q8N0U7 546 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 WDR13Q9H1Z4 485 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 RIMS4Q9H426 269 aaPredicted RBP13.82□□□□□ -0.2
TPM1-219ENST00000559397 ZNF286AQ9HBT8 521 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 NPTNQ9Y639 398 aa13.82□□□□□ -0.2
TPM1-219ENST00000559397 POM121CA8CG34 1229 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 A8MV72 311 aaPredicted RBP13.81□□□□□ -0.2
TPM1-219ENST00000559397 SDCBPO00560 298 aaPredicted RBP13.81□□□□□ -0.2
TPM1-219ENST00000559397 SH2D1BO14796 132 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 OR2H2O95918 312 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 SULT1A3P0DMM9 295 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 SULT1A4P0DMN0 295 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 ZNF44P15621 663 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 LMO1P25800 156 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 PDLIM4P50479 330 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 TMEM33P57088 247 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 ARPC4P59998 168 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 AADACL3Q5VUY0 350 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 ZNF660Q6AZW8 331 aaPredicted RBP13.81□□□□□ -0.2
TPM1-219ENST00000559397 FIP1L1Q6UN15 594 aaKnown RBP13.81□□□□□ -0.2
TPM1-219ENST00000559397 TCTE3Q8IZS6 198 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 OR11H7Q8NGC8 314 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 CCDC107Q8WV48 283 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 Q9N2K0 584 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 RASL12Q9NYN1 266 aa13.81□□□□□ -0.2
TPM1-219ENST00000559397 SLC33A1O00400 549 aaPredicted RBP13.8□□□□□ -0.2
TPM1-219ENST00000559397 CREBL2O60519 120 aaPredicted RBP13.8□□□□□ -0.2
TPM1-219ENST00000559397 ZNF205O95201 554 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 KNG1P01042 644 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 GLRA1P23415 457 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 CD80P33681 288 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 TSPAN5P62079 268 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 TEX36Q5VZQ5 186 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 ZNF880Q6PDB4 577 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 PEG10Q86TG7 708 aaKnown RBP13.8□□□□□ -0.2
TPM1-219ENST00000559397 SLC25A42Q86VD7 318 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 GAPTQ8N292 157 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 BOLLQ8N9W6 283 aaKnown RBP13.8□□□□□ -0.2
TPM1-219ENST00000559397 SEBOXQ9HB31 216 aaPredicted RBP13.8□□□□□ -0.2
TPM1-219ENST00000559397 RANGRFQ9HD47 186 aaPredicted RBP13.8□□□□□ -0.2
TPM1-219ENST00000559397 NECAP2Q9NVZ3 263 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 ETAA1Q9NY74 926 aa13.8□□□□□ -0.2
TPM1-219ENST00000559397 ZNF469Q96JG9 3925 aaPredicted RBP13.8□□□□□ -0.2
TPM1-219ENST00000559397 PPIAL4EA0A075B759 164 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 PPIAL4DF5H284 164 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 FSTL3O95633 263 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 HAND1O96004 215 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 PPIAL4FP0DN26 164 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 GMFBP60983 142 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 CD83Q01151 205 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 DHRS11Q6UWP2 260 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 KRTAP1-3Q8IUG1 177 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 MRPL30Q8TCC3 161 aaKnown RBP13.79□□□□□ -0.2
TPM1-219ENST00000559397 MARCH1Q8TCQ1 289 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 NEK7Q8TDX7 302 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 CAPSLQ8WWF8 208 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 DACT3Q96B18 629 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms