RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 OR13A1Q8NGR1 328 aa10.24□□□□□ -0.77
GABPB1-208ENST00000558970 MRGPRDQ8TDS7 321 aa10.24□□□□□ -0.77
GABPB1-208ENST00000558970 RAB3CQ96E17 227 aa10.24□□□□□ -0.77
GABPB1-208ENST00000558970 MRI1Q9BV20 369 aa10.24□□□□□ -0.77
GABPB1-208ENST00000558970 C6orf62Q9GZU0 229 aaPredicted RBP10.24□□□□□ -0.77
GABPB1-208ENST00000558970 SEBOXQ9HB31 216 aaPredicted RBP10.24□□□□□ -0.77
GABPB1-208ENST00000558970 SIRT7Q9NRC8 400 aa10.24□□□□□ -0.77
GABPB1-208ENST00000558970 AK3Q9UIJ7 227 aa10.24□□□□□ -0.77
GABPB1-208ENST00000558970 ELF5Q9UKW6 265 aaPredicted RBP10.24□□□□□ -0.77
GABPB1-208ENST00000558970 ABCA1O95477 2261 aa10.24□□□□□ -0.77
GABPB1-208ENST00000558970 TRGV10A0A0A0MS01 117 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 TRBV23-1A0A0A0MS06 115 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 KIR2DS1A0A191URI9 304 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 hADV38S2A0JD32 116 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 TMEM30CPA0ZSE6 113 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 FUOMA2VDF0 154 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 FOXI3A8MTJ6 420 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-208ENST00000558970 RAB27BO00194 218 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 TOX4O94842 621 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 AVPP01185 164 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 CSN2P05814 226 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 PTHLHP12272 177 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 OMGP23515 440 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 CDK2P24941 298 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 KLRD1Q13241 179 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 MZT2AQ6P582 158 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 VMO1Q7Z5L0 202 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 C5orf24Q7Z6I8 188 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 LY6G5BQ8NDX9 201 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 AP3S1Q92572 193 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 PTX4Q96A99 478 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 DACT3Q96B18 629 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-208ENST00000558970 KCTD12Q96CX2 325 aaKnown RBP10.23□□□□□ -0.77
GABPB1-208ENST00000558970 ZNF714Q96N38 554 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 TMPRSS13Q9BYE2 586 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 CCDC59Q9P031 241 aaKnown RBP10.23□□□□□ -0.77
GABPB1-208ENST00000558970 TRAPPC2LQ9UL33 140 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 POLR3KQ9Y2Y1 108 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-208ENST00000558970 AUP1Q9Y679 476 aa10.23□□□□□ -0.77
GABPB1-208ENST00000558970 NSD1Q96L73 2696 aaPredicted RBP10.22□□□□□ -0.77
GABPB1-208ENST00000558970 TRAV18A0A075B6X5 111 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 A0A1W2PRD5 423 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 A0A1W2PRF3 423 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 A0A1W2PRM7 423 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 TMEM235A6NFC5 223 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 INAFM1C9JVW0 142 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 CTDSP2O14595 271 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 ELK1P19419 428 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 KCNJ3P48549 501 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 SCAND1P57086 179 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 MRPS15P82914 257 aaKnown RBP10.22□□□□□ -0.77
GABPB1-208ENST00000558970 ARFRP1Q13795 201 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 CDNFQ49AH0 187 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 FAM120AOSQ5T036 256 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 PRAMEF5Q5TYX0 476 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 ZNF497Q6ZNH5 498 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 LAX1Q8IWV1 398 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 MCFD2Q8NI22 146 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 C8orf46Q8TAG6 207 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 MRPL30Q8TCC3 161 aaKnown RBP10.22□□□□□ -0.77
GABPB1-208ENST00000558970 ACOT12Q8WYK0 555 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 MAFIPQ8WZ33 124 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 GCDHQ92947 438 aaPredicted RBP10.22□□□□□ -0.77
GABPB1-208ENST00000558970 CMSS1Q9BQ75 279 aaKnown RBP10.22□□□□□ -0.77
GABPB1-208ENST00000558970 NDUFA13Q9P0J0 144 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 KCNK7Q9Y2U2 307 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 LINC00312Q9Y6C7 94 aa10.22□□□□□ -0.77
GABPB1-208ENST00000558970 TRAV40A0A0B4J280 105 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 A0A1W2PPH5 198 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 MT-ND4P03905 459 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 FCER2P06734 321 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 CD3GP09693 182 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 ZNF728P0DKX0 622 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 HIST1H1DP16402 221 aaKnown RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 RCC1P18754 421 aaPredicted RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 ERP29P30040 261 aaKnown RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 SSTR5P35346 364 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 MEF2CQ06413 473 aaPredicted RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 PAX8Q06710 450 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 FAM189A2Q15884 450 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 RNASE12Q5GAN4 147 aaKnown RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 SLC35E4Q6ICL7 350 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 BAIAP2L2Q6UXY1 529 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 C1orf229Q6ZS94 237 aaPredicted RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 Q8N7P7 452 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 RFESDQ8TAC1 157 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 NUDCD2Q8WVJ2 157 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 LHX4Q969G2 390 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 DGCR14Q96DF8 476 aaKnown RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 S100A16Q96FQ6 103 aaKnown RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 WDFY2Q96P53 400 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 SLIRPQ9GZT3 109 aaKnown RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 SIRPDQ9H106 197 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 DIABLOQ9NR28 239 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 LPAR3Q9UBY5 353 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 OPN4Q9UHM6 478 aa10.21□□□□□ -0.77
GABPB1-208ENST00000558970 MRPS7Q9Y2R9 242 aaKnown RBP10.21□□□□□ -0.77
GABPB1-208ENST00000558970 IGHV3-43A0A0B4J1X8 118 aa10.2□□□□□ -0.78
GABPB1-208ENST00000558970 MEIS3P1A6NDR6 274 aa10.2□□□□□ -0.78
GABPB1-208ENST00000558970 H3BUI4 141 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms