RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 CLEC12BQ2HXU8 276 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 LGALSLQ3ZCW2 172 aaPredicted RBP2.35□□□□□ -2.03
CASC4-206ENST00000558847 TTC33Q6PID6 262 aaPredicted RBP2.35□□□□□ -2.03
CASC4-206ENST00000558847 MTERF4Q7Z6M4 381 aaKnown RBP2.35□□□□□ -2.03
CASC4-206ENST00000558847 ZFP82Q8N141 532 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 FER1L6-AS1Q8NA97 138 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 OR4P4Q8NGL7 312 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 CMBLQ96DG6 245 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 TM2D3Q9BRN9 247 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 SHANK2-AS3Q9BTD1 123 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 ANGPTL4Q9BY76 406 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 ASF1BQ9NVP2 202 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 DMAC2Q9NW81 257 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 ICOSQ9Y6W8 199 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 TRIP11Q15643 1979 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 TICRRQ7Z2Z1 1910 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 ATRNO75882 1429 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.34□□□□□ -2.03
CASC4-206ENST00000558847 BAZ1BQ9UIG0 1483 aaKnown RBP2.34□□□□□ -2.03
CASC4-206ENST00000558847 TOX3O15405 576 aaPredicted RBP2.34□□□□□ -2.03
CASC4-206ENST00000558847 FGF16O43320 207 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 PSIP1O75475 530 aaKnown RBP2.34□□□□□ -2.03
CASC4-206ENST00000558847 GUSBP08236 651 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 ACTR1BP42025 376 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 INPP1P49441 399 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 DLX6P56179 175 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 BCL2A1Q16548 175 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 ZCWPW2Q504Y3 356 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 ZNF660Q6AZW8 331 aaPredicted RBP2.34□□□□□ -2.03
CASC4-206ENST00000558847 AMMECR1LQ6DCA0 310 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 NIT1Q86X76 327 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 MUC15Q8N387 334 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 RNASEH2CQ8TDP1 164 aaKnown RBP2.34□□□□□ -2.03
CASC4-206ENST00000558847 GABARAPL1Q9H0R8 117 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 ZNHIT6Q9NWK9 470 aaKnown RBP2.34□□□□□ -2.03
CASC4-206ENST00000558847 FBXL3Q9UKT7 428 aa2.34□□□□□ -2.03
CASC4-206ENST00000558847 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.34□□□□□ -2.03
CASC4-206ENST00000558847 LOXHD1Q8IVV2 1947 aa2.34□□□□□ -2.04
CASC4-206ENST00000558847 NID2Q14112 1375 aa2.34□□□□□ -2.04
CASC4-206ENST00000558847 GPR179Q6PRD1 2367 aa2.34□□□□□ -2.04
CASC4-206ENST00000558847 OR5H14A6NHG9 310 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 ZNF729A6NN14 1252 aaPredicted RBP2.33□□□□□ -2.04
CASC4-206ENST00000558847 C4orf51C9J302 202 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 TOR1AO14656 332 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 SLC31A1O15431 190 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 CDK14O94921 469 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 F8A1P23610 371 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 CD34P28906 385 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 MP68P56378 58 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 KLF3P57682 345 aaPredicted RBP2.33□□□□□ -2.04
CASC4-206ENST00000558847 GTF2BQ00403 316 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 NIPAL1Q6NVV3 410 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 CLEC20AQ6ZU45 233 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 CMTM2Q8TAZ6 248 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 APOBEC3DQ96AK3 386 aaPredicted RBP2.33□□□□□ -2.04
CASC4-206ENST00000558847 FXYD5Q96DB9 178 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 OTUB2Q96DC9 234 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 SMIM12Q96EX1 92 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 TMEM56Q96MV1 263 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 PRSS27Q9BQR3 290 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 OR51E2Q9H255 320 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 TBL2Q9Y4P3 447 aaKnown RBP2.33□□□□□ -2.04
CASC4-206ENST00000558847 SCN4AP35499 1836 aa2.33□□□□□ -2.04
CASC4-206ENST00000558847 IGKV1OR2-108A0A075B7D4 117 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 ARGFXA6NJG6 315 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 VGLL3A8MV65 326 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 GPR171O14626 319 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 SYNGR2O43760 224 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 MPZL2O60487 215 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 BRI3O95415 125 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 IGLV6-57P01721 117 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 GYPCP04921 128 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 PET100P0DJ07 73 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 ZNF3P17036 446 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 PRPS1L1P21108 318 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 CRABP2P29373 138 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 BAMBIQ13145 260 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 SKP2Q13309 424 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 IHHQ14623 411 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 CASP8Q14790 479 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 PDZD11Q5EBL8 140 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 SPIN3Q5JUX0 258 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 LAIR2Q6ISS4 152 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 FAM45BPQ6NSW5 357 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 SPNS3Q6ZMD2 512 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 PLEKHG7Q6ZR37 379 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 FAM9CQ8IZT9 166 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 LINC00304Q8N9R0 145 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 LFNGQ8NES3 379 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 OR5K1Q8NHB7 308 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 TVP23CQ96ET8 276 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 REEP6Q96HR9 211 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 FAM210AQ96ND0 272 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 RTBDNQ9BSG5 229 aaPredicted RBP2.32□□□□□ -2.04
CASC4-206ENST00000558847 DCUN1D5Q9BTE7 237 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 BBS2Q9BXC9 721 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 HDHD2Q9H0R4 259 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 SPANXB1Q9NS25 103 aaPredicted RBP2.32□□□□□ -2.04
CASC4-206ENST00000558847 TMEM216Q9P0N5 145 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 BTRCQ9Y297 605 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms