RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GNB3P16520 340 aa17.51■□□□□ 0.39
CASC4-204ENST00000557945 GLP1RP43220 463 aa17.51■□□□□ 0.39
CASC4-204ENST00000557945 S100A16Q96FQ6 103 aaKnown RBP17.51■□□□□ 0.39
CASC4-204ENST00000557945 DMRTB1Q96MA1 342 aa17.51■□□□□ 0.39
CASC4-204ENST00000557945 ZMAT3Q9HA38 289 aaKnown RBP17.51■□□□□ 0.39
CASC4-204ENST00000557945 OR6C3Q9NZP0 311 aa17.51■□□□□ 0.39
CASC4-204ENST00000557945 AK3Q9UIJ7 227 aa17.51■□□□□ 0.39
CASC4-204ENST00000557945 LINC00312Q9Y6C7 94 aa17.51■□□□□ 0.39
CASC4-204ENST00000557945 TRAV39A0A0B4J263 110 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 HPGDSO60760 199 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 CA11O75493 328 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 MT-ND4P03905 459 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 PAX5Q02548 391 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 FOXB2Q5VYV0 432 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 TCF23Q7RTU1 214 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 ZNF565Q8N9K5 539 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 OR4K15Q8NH41 348 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 ZNF714Q96N38 554 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 WDFY2Q96P53 400 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 PCGF1Q9BSM1 259 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 ABCG5Q9H222 651 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 CHMP1AQ9HD42 196 aaPredicted RBP17.5■□□□□ 0.39
CASC4-204ENST00000557945 DIABLOQ9NR28 239 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 TRAPPC2LQ9UL33 140 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 UBE2J1Q9Y385 318 aaPredicted RBP17.5■□□□□ 0.39
CASC4-204ENST00000557945 KPTNQ9Y664 436 aa17.5■□□□□ 0.39
CASC4-204ENST00000557945 TOX4O94842 621 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 ZNF728P0DKX0 622 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 HIST1H1DP16402 221 aaKnown RBP17.49■□□□□ 0.39
CASC4-204ENST00000557945 OLFML2AQ68BL7 652 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 KIR3DL3Q8N743 410 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 DTX3Q8N9I9 347 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 OR13A1Q8NGR1 328 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 MRGPRDQ8TDS7 321 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 NCOR1P1Q9H4R4 102 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 OPN4Q9UHM6 478 aa17.49■□□□□ 0.39
CASC4-204ENST00000557945 TRAV18A0A075B6X5 111 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 FAM25AB3EWG3 89 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 FAM25CB3EWG5 89 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 FAM25GB3EWG6 89 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 M0R1W7 72 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 RGS5O15539 181 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 EIF4EP06730 217 aaKnown RBP17.48■□□□□ 0.39
CASC4-204ENST00000557945 CDK2P24941 298 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 MRPS15P82914 257 aaKnown RBP17.48■□□□□ 0.39
CASC4-204ENST00000557945 CDNFQ49AH0 187 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 CORO2AQ92828 525 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 CMSS1Q9BQ75 279 aaKnown RBP17.48■□□□□ 0.39
CASC4-204ENST00000557945 SLIRPQ9GZT3 109 aaKnown RBP17.48■□□□□ 0.39
CASC4-204ENST00000557945 SIRPDQ9H106 197 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 GAL3ST2Q9H3Q3 398 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 KCNK7Q9Y2U2 307 aa17.48■□□□□ 0.39
CASC4-204ENST00000557945 A0A0A6YYH2 397 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 hCG_1809904A0A1W2PP81 198 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 A0A1W2PPE2 198 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 A0A1W2PR64 198 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 A0A1W2PRV1 198 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 A6NHS1 94 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 A6NJ64 397 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 MFNGO00587 321 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 AVPP01185 164 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 APOA1P02647 267 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 CD3GP09693 182 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 ARL6IP1Q15041 203 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 FAM120AOSQ5T036 256 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 VMO1Q7Z5L0 202 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 IZUMO1Q8IYV9 350 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 Q8N7P7 452 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 MCFD2Q8NI22 146 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 SETD6Q8TBK2 473 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 CMTM3Q96MX0 182 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 HDHD3Q9BSH5 251 aaPredicted RBP17.47■□□□□ 0.39
CASC4-204ENST00000557945 C6orf62Q9GZU0 229 aaPredicted RBP17.47■□□□□ 0.39
CASC4-204ENST00000557945 SIRT7Q9NRC8 400 aa17.47■□□□□ 0.39
CASC4-204ENST00000557945 KIAA2026Q5HYC2 2103 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 HIVEP2P31629 2446 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 SERPINE3A8MV23 424 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 MMP9P14780 707 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 ELK1P19419 428 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 DLX6P56179 175 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 ERVFRD-1P60508 538 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 PRB3Q04118 309 aaPredicted RBP17.46■□□□□ 0.39
CASC4-204ENST00000557945 ARFRP1Q13795 201 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 TMEM69Q5SWH9 247 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 C1orf122Q6ZSJ8 110 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 IL17RELQ6ZVW7 336 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 GAPTQ8N292 157 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 MRPL30Q8TCC3 161 aaKnown RBP17.46■□□□□ 0.39
CASC4-204ENST00000557945 TBX15Q96SF7 602 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 METTL8Q9H825 291 aaKnown RBP17.46■□□□□ 0.39
CASC4-204ENST00000557945 C12orf4Q9NQ89 552 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 TAS2R3Q9NYW6 316 aa17.46■□□□□ 0.39
CASC4-204ENST00000557945 DSCAML1Q8TD84 2053 aa17.45■□□□□ 0.38
CASC4-204ENST00000557945 ZNF729A6NN14 1252 aaPredicted RBP17.45■□□□□ 0.38
CASC4-204ENST00000557945 CTDSP2O14595 271 aa17.45■□□□□ 0.38
CASC4-204ENST00000557945 XRCC3O43542 346 aa17.45■□□□□ 0.38
CASC4-204ENST00000557945 GSTP1P09211 210 aaKnown RBP17.45■□□□□ 0.38
CASC4-204ENST00000557945 HNF1AP20823 631 aa17.45■□□□□ 0.38
CASC4-204ENST00000557945 DLX1P56177 255 aa17.45■□□□□ 0.38
CASC4-204ENST00000557945 ZNF260Q3ZCT1 412 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms