RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 STK11Q15831 433 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 BCL2A1Q16548 175 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 NADK2Q4G0N4 442 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 FAM74A3Q4VXF1 159 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 C1orf140Q5VVS0 124 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ACSM5Q6NUN0 579 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 NIPAL3Q6P499 406 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 CD200R1LQ6Q8B3 271 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 SHISA6Q6ZSJ9 500 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 AHSA2Q719I0 299 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ASCL5Q7RTU5 278 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ERASQ7Z444 233 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 NANOGNBQ7Z5D8 188 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 MARCH3Q86UD3 253 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ZNF100Q8IYN0 542 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 PRSS58Q8IYP2 241 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 SYS1Q8N2H4 156 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ZFP62Q8NB50 900 aaPredicted RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 MDS2Q8NDY4 140 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 BPIFB6Q8NFQ5 453 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 OR5AU1Q8NGC0 362 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 OR13C2Q8NGS9 318 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 OR52N1Q8NH53 320 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 PFN4Q8NHR9 129 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ZNF563Q8TA94 476 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RPS4Y2Q8TD47 263 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 DOK4Q8TEW6 326 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 DCUN1D4Q92564 292 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RORBQ92753 470 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ITFG2Q969R8 447 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 FGGYQ96C11 551 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 YIPF6Q96EC8 236 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 MRPL48Q96GC5 212 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 PLEKHA8Q96JA3 519 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 NOL4LQ96MY1 436 aaPredicted RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 ZNF649Q9BS31 505 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ALG12Q9BV10 488 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 MND1Q9BWT6 205 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 TAPBPLQ9BX59 468 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 TSSK6Q9BXA6 273 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 TXNIPQ9H3M7 391 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 DSN1Q9H410 356 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 METTL7AQ9H8H3 244 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RNF122Q9H9V4 155 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ZNF160Q9HCG1 818 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 PAQR5Q9NXK6 330 aaPredicted RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 TAS2R5Q9NYW4 299 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RSL24D1Q9UHA3 163 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 BOKQ9UMX3 212 aaPredicted RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 ERGIC3Q9Y282 383 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 CAB39Q9Y376 341 aaPredicted RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 COMMD3-BMI1R4GMX3 469 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ARFGEF3Q5TH69 2177 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ANKHD1Q8IWZ3 2542 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 BSNQ9UPA5 3926 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 PKD1L2Q7Z442 2459 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 ABCA4P78363 2273 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TRAV27A0A087WT01 109 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TRBV6-6A0A0A6YYG2 114 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 A0A0U1RQV5 110 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 SPAARA0A1B0GVQ0 90 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 A0A1W2PRG6 482 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TMEM72A0PK05 275 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 PRSS37A4D1T9 235 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 CCDC182A6NF36 153 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 F8WDY8 70 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 KLRC4-KLRK1H3BQV0 150 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 CCRL2O00421 344 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 PLPP3O14495 311 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 PHYHO14832 338 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 MYL12BO14950 172 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 NOL3O60936 208 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 B3GALNT1O75752 331 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 SC5DO75845 299 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 SULT1C4O75897 302 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 GLSO94925 669 aaPredicted RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 P04436 131 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 LIMS3P0CW19 117 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 LIMS4P0CW20 117 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 CALCBP10092 127 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 CCL3P10147 92 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 HIST1H1CP16403 213 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 MYL12AP19105 171 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 SERPINA2P20848 420 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 CRABP1P29762 137 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 FGF9P31371 208 aaPredicted RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 OTX2P32243 289 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 UGT2B10P36537 528 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TGFBR2P37173 567 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 RPL29P47914 159 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 TGM4P49221 684 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 GTF2A1P52655 376 aaPredicted RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 SUCLG1P53597 346 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 ACTA2P62736 377 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 RPL8P62917 257 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 ACTG2P63267 376 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 SLC35A1P78382 337 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 MRPS11P82912 194 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 CDC20Q12834 499 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 FOXF1Q12946 379 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms