RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PPIAL4EA0A075B759 164 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 IGKV1D-8A0A087WSZ0 117 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 A0A0A6YYJ9 748 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 LINC00854A0A1B0GVQ3 168 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ISPDA4D126 451 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM235A6NFC5 223 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 OOEPA6NGQ2 149 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 OR2AT4A6NND4 320 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PPIAL4DF5H284 164 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 LGALS8O00214 317 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 SLC33A1O00400 549 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 MFNGO00587 321 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 TNFRSF13BO14836 293 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 DEGS1O15121 323 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PHF1O43189 567 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PPIHO43447 177 aaKnown RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 XRCC3O43542 346 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 SSX5O60225 188 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF780AO75290 641 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 OR7C1O76099 320 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 OR2H2O95918 312 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ACAA1P09110 424 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 CD3GP09693 182 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PPIAL4FP0DN26 164 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 IRF2P14316 349 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF44P15621 663 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 CPT2P23786 658 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 CHATP28329 748 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PRDX2P32119 198 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 EFNA4P52798 201 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 CAPZA1P52907 286 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 SEC61A1P61619 476 aaKnown RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 DGCR2P98153 550 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 IFITM3Q01628 133 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 DYNC1I2Q13409 638 aaKnown RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ATXN7L3Q14CW9 347 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 BAK1Q16611 211 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 HFEQ30201 348 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 CHRFAM7AQ494W8 412 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 CDNFQ49AH0 187 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PYDC2Q56P42 97 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM69Q5SWH9 247 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 TEX36Q5VZQ5 186 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 STUMQ69YW2 141 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 RAB12Q6IQ22 244 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 Q6ZTK2 550 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 SUMF2Q8NBJ7 301 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ZNRF1Q8ND25 227 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ANGPTL6Q8NI99 470 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 UBALD1Q8TB05 177 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 NUDCD2Q8WVJ2 157 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 NEU4Q8WWR8 484 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PTX4Q96A99 478 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 RAB3CQ96E17 227 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 S100A16Q96FQ6 103 aaKnown RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 CMTM3Q96MX0 182 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM246Q9BRR3 403 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 URM1Q9BTM9 101 aaKnown RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 MRI1Q9BV20 369 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 SRRQ9GZT4 340 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PPA2Q9H2U2 334 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM165Q9HC07 324 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 YAE1D1Q9NRH1 226 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF701Q9NV72 531 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 CTSZQ9UBR2 303 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 DNAJB11Q9UBS4 358 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF230Q9UIE0 474 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-244ENST00000556898 PPIAL4AQ9Y536 164 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 NPTNQ9Y639 398 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 VPS13CQ709C8 3753 aa4.4□□□□□ -1.71
ATXN3-244ENST00000556898 IGHV4-30-2A0A087WSY4 118 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 METTL21EPA6NDL7 271 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 LRRC30A6NM36 301 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CLDN25C9JDP6 229 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ADAM20O43506 726 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CD5LO43866 347 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 PDCD6O75340 191 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF737O75373 536 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 IGHV2-70P01814 119 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CHRM2P08172 466 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CSF3P09919 207 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 FAM157CP0CG43 387 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 HIST1H1DP16402 221 aaKnown RBP4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CD40LGP29965 261 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CFHR2P36980 270 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ETV6P41212 452 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 OR3A1P47881 315 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ATP5J2P56134 94 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 SCAND1P57086 179 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 BTG1P62324 171 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 AESQ08117 197 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 GPR176Q14439 515 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 EDDM3AQ14507 147 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 IL13RA2Q14627 380 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF846Q147U1 533 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF146Q15072 292 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF181Q2M3W8 571 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 PAN3Q58A45 887 aaKnown RBP4.39□□□□□ -1.71
ATXN3-244ENST00000556898 NHLRC3Q5JS37 347 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 FAM53AQ6NSI3 398 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms