RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PPIAL4CA0A0B4J2A2 164 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 IGHV2-70DA0A0C4DH43 119 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 TMEM30CPA0ZSE6 113 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 TMEM235A6NFC5 223 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 TGFAP01135 160 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 PPIAL4GP0DN37 164 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 PTHLHP12272 177 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 TAS2R20P59543 309 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 ZNF273Q14593 569 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 C11orf91Q3C1V1 193 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 TMEM69Q5SWH9 247 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 CYB5R2Q6BCY4 276 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 CNIH2Q6PI25 160 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 Q6ZPA2 131 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 Q71RC1 249 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-211ENST00000556536 GAPTQ8N292 157 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 MRPL30Q8TCC3 161 aaKnown RBP14.35□□□□□ -0.11
TUBB3-211ENST00000556536 CCDC107Q8WV48 283 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 EXTL2Q9UBQ6 330 aa14.35□□□□□ -0.11
TUBB3-211ENST00000556536 MALRD1Q5VYJ5 2156 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 KIR2DS1A0A191URI9 304 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 A0A1W2PQ09 198 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 FUOMA2VDF0 154 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 ENSAO43768 121 aaKnown RBP14.34□□□□□ -0.11
TUBB3-211ENST00000556536 INHBBP09529 407 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 TNFSF8P32971 234 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 MEF2CQ06413 473 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-211ENST00000556536 OR13A1Q8NGR1 328 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 OR4K15Q8NH41 348 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 TMEM186Q96B77 213 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 SMR3AQ99954 134 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 AUNIPQ9H7T9 357 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.34□□□□□ -0.11
TUBB3-211ENST00000556536 HIF1ANQ9NWT6 349 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 CR1P17927 2039 aa14.34□□□□□ -0.11
TUBB3-211ENST00000556536 TRAV20A0A0B4J274 112 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 hADV38S2A0JD32 116 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 SERPINE3A8MV23 424 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 CA11O75493 328 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 CLPXO76031 633 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 NAPSAO96009 420 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 HLA-DQB1P01920 261 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 GSTP1P09211 210 aaKnown RBP14.33□□□□□ -0.12
TUBB3-211ENST00000556536 CCL3L1P16619 93 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 HACD4Q5VWC8 232 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 OR6Q1Q8NGQ2 317 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 MRGPRDQ8TDS7 321 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 WDFY2Q96P53 400 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 CMSS1Q9BQ75 279 aaKnown RBP14.33□□□□□ -0.12
TUBB3-211ENST00000556536 NCOR1P1Q9H4R4 102 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 ADAM30Q9UKF2 790 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 MRPS7Q9Y2R9 242 aaKnown RBP14.33□□□□□ -0.12
TUBB3-211ENST00000556536 INSIG2Q9Y5U4 225 aa14.33□□□□□ -0.12
TUBB3-211ENST00000556536 SSX5O60225 188 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 LIPFP07098 398 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 MELTFP08582 738 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 CD3GP09693 182 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 RCC1P18754 421 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-211ENST00000556536 GLP1RP43220 463 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 DVL1P1P54792 670 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-211ENST00000556536 DLX6P56179 175 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 ARF6P62330 175 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 ARFRP1Q13795 201 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 ARL6IP1Q15041 203 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 CLEC9AQ6UXN8 241 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 C5orf24Q7Z6I8 188 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 TRAPPC6BQ86SZ2 158 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 GLCCI1Q86VQ1 547 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 NUDCD2Q8WVJ2 157 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 CORO2AQ92828 525 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 GCDHQ92947 438 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-211ENST00000556536 DIRAS2Q96HU8 199 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 CHMP1AQ9HD42 196 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-211ENST00000556536 C12orf4Q9NQ89 552 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 PTTG2Q9NZH5 202 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 OR6C3Q9NZP0 311 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 ONECUT1Q9UBC0 465 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 LPAR3Q9UBY5 353 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 TRAPPC2LQ9UL33 140 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 LINC00312Q9Y6C7 94 aa14.32□□□□□ -0.12
TUBB3-211ENST00000556536 TRGV10A0A0A0MS01 117 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 CGB3P0DN86 165 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 CGB7P0DN87 165 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 TALDO1P37837 337 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 MNDAP41218 407 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 ERVFRD-1P60508 538 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 GUCA2AQ02747 115 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 PNLIPRP3Q17RR3 467 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 DCAF12L2Q5VW00 463 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 SNX29P2Q8IUI4 249 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 MDFIQ99750 246 aa14.31□□□□□ -0.12
TUBB3-211ENST00000556536 UBE2J1Q9Y385 318 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-211ENST00000556536 TRBV6-6A0A0A6YYG2 114 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 A0A0G2JMP0 313 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 A0A0X1KG70 313 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 CD5LO43866 347 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 ZNF728P0DKX0 622 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 S100A5P33763 92 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 GNG2P59768 71 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 PAX8Q06710 450 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms