RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MMD2Q8IY49 270 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 NUDT8Q8WV74 236 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 ZNF501Q96CX3 271 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-216ENST00000556083 EID2BQ96D98 161 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 SCNM1Q9BWG6 230 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 LPAR2Q9HBW0 351 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 SLC6A13Q9NSD5 602 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 FLRT3Q9NZU0 649 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 A0A1W2PPV9 198 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 H3BP45 60 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 FCN1O00602 326 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 P01737 135 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 USF1P22415 310 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-216ENST00000556083 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
ACTN1-216ENST00000556083 NHLH1Q02575 133 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 NHLH2Q02577 135 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 CEACAM21Q3KPI0 293 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 C5orf17Q8NAS9 161 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 MRPL30Q8TCC3 161 aaKnown RBP9.4□□□□□ -0.9
ACTN1-216ENST00000556083 IL22RA2Q969J5 263 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 PARP12Q9H0J9 701 aaKnown RBP9.4□□□□□ -0.9
ACTN1-216ENST00000556083 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 R4GN57 208 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 A0A1W2PNV4 684 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 TMPRSS2O15393 492 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 HBZP02008 142 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 C1QAP02745 245 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 CBR1P16152 277 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 TMEM33P57088 247 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 KRTDAPP60985 99 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 SEZ6L2Q6UXD5 910 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 RELL2Q8NC24 303 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-216ENST00000556083 OR52B4Q8NGK2 314 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 ZG16BQ96DA0 208 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 HARBI1Q96MB7 349 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 ELOBQ15370 118 aa9.4□□□□□ -0.91
ACTN1-216ENST00000556083 ST3GAL2Q16842 350 aa9.4□□□□□ -0.91
ACTN1-216ENST00000556083 PSMG4Q5JS54 123 aa9.4□□□□□ -0.91
ACTN1-216ENST00000556083 OR8I2Q8N0Y5 310 aa9.4□□□□□ -0.91
ACTN1-216ENST00000556083 SNX22Q96L94 193 aa9.4□□□□□ -0.91
ACTN1-216ENST00000556083 RPP25Q9BUL9 199 aaKnown RBP9.4□□□□□ -0.91
ACTN1-216ENST00000556083 DSPPQ9NZW4 1301 aa9.4□□□□□ -0.91
ACTN1-216ENST00000556083 K7N7A8 449 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 CDC42EP2O14613 210 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 SMPD2O60906 423 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 ISG15P05161 165 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 FAM106CPP0CH98 169 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 SCGB1C2P0DMR2 95 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 COX7A1P24310 79 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 METAP1P53582 386 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 C10orf113Q5VZT2 155 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 FDX2Q6P4F2 183 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 H1FOOQ8IZA3 346 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-216ENST00000556083 BATF2Q8N1L9 274 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 OR8D4Q8NGM9 314 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 RFESDQ8TAC1 157 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 ZNF721Q8TF20 911 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 COA4Q9NYJ1 87 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 MYH14Q7Z406 1995 aaKnown RBP9.39□□□□□ -0.91
ACTN1-216ENST00000556083 FFAR1O14842 300 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 IL9P15248 144 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 MAGEA5P43359 124 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 LYZP61626 148 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 CD226Q15762 336 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 PLPPR5Q32ZL2 321 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 FAM109BQ6ICB4 259 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-216ENST00000556083 PRSS41Q7RTY9 318 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 DNASE2BQ8WZ79 361 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 ZMIZ1Q9ULJ6 1067 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 HSF4Q9ULV5 492 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 WIPI2Q9Y4P8 454 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 WNT9BO14905 357 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 PTP4A3O75365 173 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 FGF12P61328 243 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 SP6Q3SY56 376 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 SAMD13Q5VXD3 122 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 CLEC18BQ6UXF7 455 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 NECAP1Q8NC96 275 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 TMEM116Q8NCL8 245 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 NPVFQ9HCQ7 196 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 ELOVL5Q9NYP7 299 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 FRRS1LQ9P0K9 344 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 TNFSF18Q9UNG2 199 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 STRCP1A6NGW2 1772 aa9.39□□□□□ -0.91
ACTN1-216ENST00000556083 CTSSP25774 331 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 ADAMTS7Q9UKP4 1686 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 OR2A4O95047 310 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 RBM11P57052 281 aaKnown RBP9.38□□□□□ -0.91
ACTN1-216ENST00000556083 LRRC75BQ2VPJ9 315 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 NRN1LQ496H8 165 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 SPINK14Q6IE38 97 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 MOGAT3Q86VF5 341 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 OR2A7Q96R45 310 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 FOXS1O43638 330 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
ACTN1-216ENST00000556083 AMER3Q8N944 861 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 DYNLRB2Q8TF09 96 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 ABHD3Q8WU67 409 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 SNRNP40Q96DI7 357 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms