RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 GFRA3O60609 400 aa20.33■□□□□ 0.84
STRN3-207ENST00000555358 PDCD6O75340 191 aa20.33■□□□□ 0.84
STRN3-207ENST00000555358 B4GALT1P15291 398 aa20.33■□□□□ 0.84
STRN3-207ENST00000555358 PDCD1Q15116 288 aa20.33■□□□□ 0.84
STRN3-207ENST00000555358 CEACAM16Q2WEN9 425 aa20.33■□□□□ 0.84
STRN3-207ENST00000555358 ZNF100Q8IYN0 542 aa20.33■□□□□ 0.84
STRN3-207ENST00000555358 TMEM45BQ96B21 275 aa20.33■□□□□ 0.84
STRN3-207ENST00000555358 BOD1Q96IK1 185 aa20.33■□□□□ 0.84
STRN3-207ENST00000555358 MED19A0JLT2 244 aaPredicted RBP20.32■□□□□ 0.84
STRN3-207ENST00000555358 SMIM6P0DI80 62 aa20.32■□□□□ 0.84
STRN3-207ENST00000555358 CBR1P16152 277 aa20.32■□□□□ 0.84
STRN3-207ENST00000555358 GLP1RP43220 463 aa20.32■□□□□ 0.84
STRN3-207ENST00000555358 CPT1CQ8TCG5 803 aa20.32■□□□□ 0.84
STRN3-207ENST00000555358 SLC35B3Q9H1N7 401 aa20.32■□□□□ 0.84
STRN3-207ENST00000555358 GPR35Q9HC97 309 aa20.32■□□□□ 0.84
STRN3-207ENST00000555358 DMXL2Q8TDJ6 3036 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 MRPL33O75394 65 aaKnown RBP20.31■□□□□ 0.84
STRN3-207ENST00000555358 S100A8P05109 93 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 PPP1CCP36873 323 aaKnown RBP20.31■□□□□ 0.84
STRN3-207ENST00000555358 HTR5AP47898 357 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 EWSR1Q01844 656 aaKnown RBP eCLIP20.31■□□□□ 0.84
STRN3-207ENST00000555358 CCDC71LQ8N9Z2 235 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 FBXO7Q9Y3I1 522 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 DOCK7Q96N67 2140 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 TRAV17A0A0B4J275 112 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 RAB5AP20339 215 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 FUT6P51993 359 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 PSG4Q00888 419 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 ZNF92Q03936 586 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 RHEBQ15382 184 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 OR8B8Q15620 311 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 KRBOX4Q5JUW0 171 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 TMEM182Q6ZP80 229 aaPredicted RBP20.31■□□□□ 0.84
STRN3-207ENST00000555358 NANPQ8TBE9 248 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 CEP295Q9C0D2 2601 aa20.31■□□□□ 0.84
STRN3-207ENST00000555358 ACACAQ13085 2346 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 A0A1B0GW64 132 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 S100A6P06703 90 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 SULT1A1P50225 295 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 RBM11P57052 281 aaKnown RBP20.3■□□□□ 0.84
STRN3-207ENST00000555358 MALLQ13021 153 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 TMEM211Q6ICI0 200 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 PBDC1Q9BVG4 233 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 ZNF391Q9UJN7 358 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 hCG_1809904A0A1W2PP81 198 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 A0A1W2PR64 198 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 A0A1W2PRV1 198 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 PPYP01298 95 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 ASCL1P50553 236 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 HERV-K104P61576 105 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 RIPPLY2Q5TAB7 128 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 MEX3BQ6ZN04 569 aaKnown RBP20.3■□□□□ 0.84
STRN3-207ENST00000555358 SLC16A13Q7RTY0 426 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 FGFBP3Q8TAT2 258 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 FOXB1Q99853 325 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 SCNM1Q9BWG6 230 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 WNT5BQ9H1J7 359 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 SEBOXQ9HB31 216 aaPredicted RBP20.3■□□□□ 0.84
STRN3-207ENST00000555358 SLC7A10Q9NS82 523 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 MED12LQ86YW9 2145 aa20.3■□□□□ 0.84
STRN3-207ENST00000555358 GNMTQ14749 295 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 OR1J1Q8NGS3 322 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 FAM213BQ8TBF2 198 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 KCNJ16Q9NPI9 418 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 METTL1Q9UBP6 276 aaKnown RBP20.29■□□□□ 0.84
STRN3-207ENST00000555358 ARHGAP21Q5T5U3 1957 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 C3orf85A0A1B0GTC6 90 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 NKX2-6A6NCS4 301 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 MPPED1O15442 326 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 OR2C3Q8N628 320 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 LFNGQ8NES3 379 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 OR2H1Q9GZK4 316 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 SLC7A11Q9UPY5 501 aa20.29■□□□□ 0.84
STRN3-207ENST00000555358 TRDCB7Z8K6 153 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 CDS2O95674 445 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 IGHV2-5P01817 119 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 ARG1P05089 322 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 IGSF11Q5DX21 431 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 PLCXD3Q63HM9 321 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 CALHM1Q8IU99 346 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 FAM24BQ8N5W8 94 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 MALSU1Q96EH3 234 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 TMEM222Q9H0R3 208 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 RFNGQ9Y644 331 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 SVILO95425 2214 aa20.28■□□□□ 0.84
STRN3-207ENST00000555358 A0A1W2PPE2 198 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 IGSF23A1L1A6 192 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 FAM24AA6NFZ4 105 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 ZNF14P17017 642 aaPredicted RBP20.27■□□□□ 0.84
STRN3-207ENST00000555358 FUT3P21217 361 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 FOXG1P55316 489 aaPredicted RBP20.27■□□□□ 0.84
STRN3-207ENST00000555358 FABP9Q0Z7S8 132 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 C9orf135Q5VTT2 229 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 CD300LFQ8TDQ1 290 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 ZNF442Q9H7R0 627 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 PLSCR2Q9NRY7 297 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 A0A1B0GV50 99 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 OR13C7P0DN81 318 aa20.27■□□□□ 0.84
STRN3-207ENST00000555358 NUFIP2Q7Z417 695 aaKnown RBP20.27■□□□□ 0.84
STRN3-207ENST00000555358 PIGCQ92535 297 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms