RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 KCNE4Q8WWG9 221 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 KLHDC7BQ96G42 594 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 PLK3Q9H4B4 646 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF581Q9P0T4 197 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 IGHEP01854 428 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 TTRP02766 147 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 OMGP23515 440 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 FASLGP48023 281 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 RUNX1Q01196 453 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 SLC25A24Q6NUK1 477 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 CYP2G1PQ6ZSU1 146 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 OR5C1Q8NGR4 320 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 OR2T10Q8NGZ9 312 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 ASB10Q8WXI3 467 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 SPACA5Q96QH8 159 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 AGMATQ9BSE5 352 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 PARD6GQ9BYG4 376 aaPredicted RBP13.56□□□□□ -0.24
SYNE3-203ENST00000554873 OR10A2Q9H208 303 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 FAM206AQ9NX38 181 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF319Q9P2F9 582 aa13.56□□□□□ -0.24
SYNE3-203ENST00000554873 CHD3Q12873 2000 aaKnown RBP13.56□□□□□ -0.24
SYNE3-203ENST00000554873 A0A1W2PP11 408 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 CNOT4O95628 575 aaKnown RBP13.55□□□□□ -0.24
SYNE3-203ENST00000554873 CCR5P51681 352 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 BSXQ3C1V8 233 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 LINC01551Q86U37 167 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 RNF133Q8WVZ7 376 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 CORO2AQ92828 525 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 CCDC74BQ96LY2 380 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 TMEM9BQ9NQ34 198 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 MED29Q9NX70 200 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 HPNP05981 417 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 OR3A4PP47883 348 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 DLX2Q07687 328 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-203ENST00000554873 NSDHLQ15738 373 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 CLEC12BQ2HXU8 276 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 CST9LP1Q5W188 147 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF845Q96IR2 970 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-203ENST00000554873 RASL10BQ96S79 203 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 KCNK17Q96T54 332 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF665Q9H7R5 613 aa13.55□□□□□ -0.24
SYNE3-203ENST00000554873 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 NPIPA5E9PKD4 350 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 TCN2P20062 427 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF787Q6DD87 383 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 TMEM252Q8N6L7 170 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 RTN4IP1Q8WWV3 396 aaPredicted RBP13.54□□□□□ -0.24
SYNE3-203ENST00000554873 SMIM7Q9BQ49 75 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 VPS25Q9BRG1 176 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 NPIPA1Q9UND3 350 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 RNF115Q9Y4L5 304 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 PPIAL4AQ9Y536 164 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 SPEGQ15772 3267 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 NUPR1O60356 82 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 ABCA11PQ4W5N1 156 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 DNM1P34Q6PK57 102 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 PBOV1Q9GZY1 135 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 OR51I2Q9H344 312 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF552Q9H707 407 aaPredicted RBP13.54□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF701Q9NV72 531 aaPredicted RBP13.54□□□□□ -0.24
SYNE3-203ENST00000554873 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 H3BMH7 237 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 LILRA1O75019 489 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 SYNGR4O95473 234 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 TAS2R30P59541 319 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 Q6ZWC4 215 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 KMT5CQ86Y97 462 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 FAM89BQ8N5H3 189 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 OR51T1Q8NGJ9 327 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 SLAMF6Q96DU3 332 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 LYRM2Q9NU23 88 aaPredicted RBP13.54□□□□□ -0.24
SYNE3-203ENST00000554873 CLEC1BQ9P126 229 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 CD207Q9UJ71 328 aa13.54□□□□□ -0.24
SYNE3-203ENST00000554873 PHF3Q92576 2039 aaKnown RBP13.54□□□□□ -0.24
SYNE3-203ENST00000554873 CLEC18AA5D8T8 446 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 CCDC85CA6NKD9 419 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 SRP14P37108 136 aaKnown RBP13.53□□□□□ -0.24
SYNE3-203ENST00000554873 DYNLT3P51808 116 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 POU3F1Q03052 451 aaPredicted RBP13.53□□□□□ -0.24
SYNE3-203ENST00000554873 ZP4Q12836 540 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 H1FNTQ75WM6 255 aaPredicted RBP13.53□□□□□ -0.24
SYNE3-203ENST00000554873 CLEC18CQ8NCF0 446 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 CMTM2Q8TAZ6 248 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 C11orf40Q8WZ69 217 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 MSI2Q96DH6 328 aaKnown RBP13.53□□□□□ -0.24
SYNE3-203ENST00000554873 IGKV1D-8A0A087WSZ0 117 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 A0A0U1RQV5 110 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 LILRA5A6NI73 299 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 SERPINE3A8MV23 424 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 TMEM238C9JI98 176 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 PROB1E7EW31 1015 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 OR2J2O76002 312 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF20P17024 532 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 EPHA8P29322 1005 aaPredicted RBP13.53□□□□□ -0.24
SYNE3-203ENST00000554873 UBE2G2P60604 165 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 OGFOD3Q6PK18 319 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 VHLLQ6RSH7 139 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 C16orf47Q6ZP98 133 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms