RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 GUSBP1Q15486 140 aa1.22□□□□□ -2.21
SCFD1-214ENST00000554819 ELP2Q6IA86 826 aa1.22□□□□□ -2.21
SCFD1-214ENST00000554819 Q6ZRU5 148 aa1.22□□□□□ -2.21
SCFD1-214ENST00000554819 FAM58AQ8N1B3 248 aa1.22□□□□□ -2.21
SCFD1-214ENST00000554819 TCAIMQ8N3R3 496 aa1.22□□□□□ -2.21
SCFD1-214ENST00000554819 KCTD4Q8WVF5 259 aa1.22□□□□□ -2.21
SCFD1-214ENST00000554819 CLDN23Q96B33 292 aa1.22□□□□□ -2.21
SCFD1-214ENST00000554819 DDIT4LQ96D03 193 aa1.22□□□□□ -2.21
SCFD1-214ENST00000554819 TDRD3Q9H7E2 651 aaKnown RBP1.22□□□□□ -2.21
SCFD1-214ENST00000554819 RPRD1BQ9NQG5 326 aaKnown RBP1.22□□□□□ -2.21
SCFD1-214ENST00000554819 ADGRB3O60242 1522 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 TRPM3Q9HCF6 1732 aaPredicted RBP1.21□□□□□ -2.22
SCFD1-214ENST00000554819 ATG2BQ96BY7 2078 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 IGHV3OR15-7A0A075B7D8 119 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 E7EWF7 191 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 F8VP50 259 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 I3L4J1 428 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 RFXANKO14593 260 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 KDELR3O43731 214 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 CA2P00918 260 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 CPMP14384 443 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 MAGEA6P43360 314 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 PLTPP55058 493 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 APOFQ13790 326 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 SLC25A45Q8N413 288 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 SPPL2BQ8TCT7 592 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 CDKL2Q92772 493 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 CIB1Q99828 191 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 COPS4Q9BT78 406 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 TM6SF2Q9BZW4 377 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 POMPQ9Y244 141 aa1.21□□□□□ -2.22
SCFD1-214ENST00000554819 GSTTP1A0A1W2PQM5 241 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 ZNF860A6NHJ4 632 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 A8MWP6 167 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 H3BRN7 92 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 PDCD6O75340 191 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 STAG3L2P0CL84 134 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 DEKP35659 375 aaKnown RBP1.2□□□□□ -2.22
SCFD1-214ENST00000554819 HBG1P69891 147 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 HBG2P69892 147 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 OLIG3Q7RTU3 272 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 FAM19A1Q7Z5A9 133 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 ZIC4Q8N9L1 334 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 OR8G5Q8NG78 346 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 OR4A15Q8NGL6 344 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 PDCD6IPQ8WUM4 868 aaKnown RBP1.2□□□□□ -2.22
SCFD1-214ENST00000554819 GTF2H4Q92759 462 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 CAPZA3Q96KX2 299 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 ZNF396Q96N95 335 aaPredicted RBP1.2□□□□□ -2.22
SCFD1-214ENST00000554819 SUCNR1Q9BXA5 334 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 CRLF2Q9HC73 371 aa1.2□□□□□ -2.22
SCFD1-214ENST00000554819 LCTP09848 1927 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 LOC102725191A0A1B0GVB3 256 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 TMEM250H0YL14 139 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 DENRO43583 198 aaKnown RBP1.19□□□□□ -2.22
SCFD1-214ENST00000554819 TRAPPC3O43617 180 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 ENSAO43768 121 aaKnown RBP1.19□□□□□ -2.22
SCFD1-214ENST00000554819 ZNF189O75820 626 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-214ENST00000554819 GIMD1P0DJR0 217 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 BGNP21810 368 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 GTF2H1P32780 548 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 GABRA4P48169 554 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 HSPA13P48723 471 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 DNASE1L1P49184 302 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 RHOAP61586 193 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 FAHD1Q6P587 224 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 SSX7Q7RTT5 188 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 KIF27Q86VH2 1401 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 SPICQ8N5J4 248 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 OR13C9Q8NGT0 318 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 CD200R1Q8TD46 325 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 GBF1Q92538 1859 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 ALX4Q9H161 411 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-214ENST00000554819 FBXL3Q9UKT7 428 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 BTRCQ9Y297 605 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 OR51B4Q9Y5P0 310 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 COL18A1P39060 1754 aa1.19□□□□□ -2.22
SCFD1-214ENST00000554819 A0A0J9YX75 114 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 IGKV2-29A2NJV5 120 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-214ENST00000554819 FAM183AA6NL82 134 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 FNDC10F2Z333 226 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 UBDO15205 165 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 IGKV5-2P06315 115 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 CRYGCP07315 174 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 GZMBP10144 247 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 ZNF3P17036 446 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 PYCR1P32322 319 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 RANBP1P43487 201 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 BAXQ07812 192 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 SS18Q15532 418 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 OR8G1Q15617 311 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 NKAIN1Q4KMZ8 207 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 ACTL10Q5JWF8 245 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 LAMTOR1Q6IAA8 161 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 CLEC20AQ6ZU45 233 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 PID1Q7Z2X4 250 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 SYS1Q8N2H4 156 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 DEFB119Q8N690 84 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 GATD1Q8NB37 220 aa1.18□□□□□ -2.22
SCFD1-214ENST00000554819 OR4K17Q8NGC6 315 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms