RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PROK1P58294 105 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 ARPC4P59998 168 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 PRB3Q04118 309 aaPredicted RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 GFOD2Q3B7J2 385 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 CLLU1Q5K131 121 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 HES5Q5TA89 166 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 GLT8D1Q68CQ7 371 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 DEGS2Q6QHC5 323 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 DRAM2Q6UX65 266 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 GLDNQ6ZMI3 551 aaPredicted RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 Q6ZSV7 163 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 PRSS45Q7RTY3 260 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 SLC36A1Q7Z2H8 476 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 DCXRQ7Z4W1 244 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 LRRTM1Q86UE6 522 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 GCSAMQ8N6F7 178 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 OR11H7Q8NGC8 314 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 OR51L1Q8NGJ5 315 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 OR2G2Q8NGZ5 317 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 OR52I2Q8NH67 350 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 H1FXQ92522 213 aaKnown RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 FOXRED1Q96CU9 486 aaPredicted RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 OR2A7Q96R45 310 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 CCL13Q99616 98 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 OPA3Q9H6K4 179 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 SCPEP1Q9HB40 452 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 MRPL22Q9NWU5 206 aaKnown RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 MTFP1Q9UDX5 166 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 UBQLN2Q9UHD9 624 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 MRM2Q9UI43 246 aaKnown RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 RPUSD1Q9UJJ7 312 aaKnown RBP7.27□□□□□ -1.25
TDP1-208ENST00000553989 VPREB3Q9UKI3 123 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 MAB21L2Q9Y586 359 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 KPTNQ9Y664 436 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 WNK1Q9H4A3 2382 aa7.27□□□□□ -1.25
TDP1-208ENST00000553989 ELOA3CA0A087WX78 387 aaPredicted RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 ZNF816-ZNF321PA0A0X1KG74 233 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 A0A1B0GW55 424 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 NKX6-3A6NJ46 265 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 HMSDA8MTL9 139 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 ZNF593O00488 134 aaPredicted RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 XRCC2O43543 280 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 NDUFB3O43676 98 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 CREBL2O60519 120 aaPredicted RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 NDUFB6O95139 128 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 PTBP3O95758 552 aaKnown RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 MT-ND4P03905 459 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 CD2P06729 351 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DUX4L2P0CJ85 424 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DUX4L3P0CJ86 424 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DUX4L4P0CJ87 422 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DUX4L5P0CJ88 424 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DUX4L6P0CJ89 424 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DUX4L7P0CJ90 424 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 MUC1P15941 1255 aaPredicted RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 HSD11B1P28845 292 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 PRSS3P35030 304 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 GNALP38405 381 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 CCR6P51684 374 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 NANOS3P60323 173 aaKnown RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 DHODHQ02127 395 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 ROM1Q03395 351 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 PCK2Q16822 640 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 LGALSLQ3ZCW2 172 aaPredicted RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 LRRC10Q5BKY1 277 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 WDR38Q5JTN6 314 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 TEX36Q5VZQ5 186 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DUX4L9Q6RFH8 374 aaPredicted RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 Q6ZTK2 550 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DPY19L4Q7Z388 723 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 KRT77Q7Z794 578 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 CDH26Q8IXH8 852 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 ZNF679Q8IYX0 411 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 FGFRL1Q8N441 504 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 FAM216BQ8N7L0 139 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DTX3Q8N9I9 347 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 ZSCAN4Q8NAM6 433 aaPredicted RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 OR13C5Q8NGS8 318 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 OTOSQ8NHW6 89 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 THEM6Q8WUY1 208 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 CCDC107Q8WV48 283 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 GIMAP1Q8WWP7 306 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 PTX4Q96A99 478 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 SLAMF6Q96DU3 332 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 OR8B4Q96RC9 309 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 PAPOLGQ9BWT3 736 aaKnown RBP7.26□□□□□ -1.25
TDP1-208ENST00000553989 C20orf85Q9H1P6 137 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 PPA2Q9H2U2 334 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 ZNRD1Q9P1U0 126 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 KAAG1Q9UBP8 84 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 CKLFQ9UBR5 152 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 DUX4Q9UBX2 424 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 SLC23A1Q9UHI7 598 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 KIF25Q9UIL4 384 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 IKZF2Q9UKS7 526 aa7.26□□□□□ -1.25
TDP1-208ENST00000553989 C5orf63A6NC05 138 aa7.25□□□□□ -1.25
TDP1-208ENST00000553989 ACOD1A6NK06 481 aa7.25□□□□□ -1.25
TDP1-208ENST00000553989 LEUTXA8MZ59 168 aa7.25□□□□□ -1.25
TDP1-208ENST00000553989 ZNF878C9JN71 531 aa7.25□□□□□ -1.25
TDP1-208ENST00000553989 NPFFO15130 113 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms