RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 PRR18Q8N4B5 295 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 FAM169BQ8N8A8 192 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 CXXC4Q9H2H0 198 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 HEXA-AS1Q9H8Q6 139 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 POLDIP2Q9Y2S7 368 aa10.77□□□□□ -0.69
VIPAS39-206ENST00000553888 LRBAP50851 2863 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 SERPINF1P36955 418 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 UCNP55089 124 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 TAS2R31P59538 309 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 NKX6-1P78426 367 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 FAHD2BQ6P2I3 314 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 UNQ6126/PRO20091Q6UXV3 157 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 TMEM171Q8WVE6 324 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 FAHD2AQ96GK7 314 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 SLA2Q9H6Q3 261 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 RDH8Q9NYR8 311 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 METRNQ9UJH8 293 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 C14orf166Q9Y224 244 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 DSCAMO60469 2012 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 DBX1A6NMT0 343 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 SPRY3O43610 288 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 PSPNO60542 156 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 PTBP3O95758 552 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 THBDP07204 575 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 ZNF728P0DKX0 622 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 CD40P25942 277 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 AP2S1P53680 142 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 PIGPP57054 158 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 IL13RA2Q14627 380 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 LINC00518Q8N0U6 118 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 BOLLQ8N9W6 283 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 MRPL37Q9BZE1 423 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 PLK3Q9H4B4 646 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 C1orf123Q9NWV4 160 aa10.76□□□□□ -0.69
VIPAS39-206ENST00000553888 C5orf51A6NDU8 294 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 C16orf97H3BN30 126 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 EGR1P18146 543 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 LY6DQ14210 128 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 PCNPQ8WW12 178 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 NCOR1P1Q9H4R4 102 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 TREM2Q9NZC2 230 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 IGKV1D-13A0A0B4J2D9 117 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 TMEM210A6NLX4 147 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 HOXB5P09067 269 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 IGKV1-13P0DP09 117 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 ATF4P18848 351 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 POC1AQ8NBT0 407 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 PPP1R1CQ8WVI7 109 aa10.75□□□□□ -0.69
VIPAS39-206ENST00000553888 SLC34A2O95436 690 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 HAND1O96004 215 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 CFDP00746 253 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 PPYP01298 95 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 ZNF250P15622 560 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 PMELP40967 661 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 FAM53AQ6NSI3 398 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 LDLRAD3Q86YD5 345 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 GON7Q9BXV9 100 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 PIGMQ9H3S5 423 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 DECR2Q9NUI1 292 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 SESN1Q9Y6P5 492 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 RAI1Q7Z5J4 1906 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 TEX13DA0A0J9YY54 714 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 CTSDP07339 412 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 KLF3P57682 345 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 LINC00596Q86U02 117 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 TPRX1Q8N7U7 411 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 IL1F10Q8WWZ1 152 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 MARC2Q969Z3 335 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 KIRREL1Q96J84 757 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 OR10C1Q96KK4 312 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 SCGB3A2Q96PL1 93 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 HES4Q9HCC6 221 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 JKAMPQ9P055 326 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 IGHV3OR15-7A0A075B7D8 119 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 DPRXA6NFQ7 191 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 TRDCB7Z8K6 153 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 ABCD4O14678 606 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 GOSR1O95249 250 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 GLRXP35754 106 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 GLP1RP43220 463 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 ZNF146Q15072 292 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 FAM201AQ5SY85 155 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 TGIF2LYQ8IUE0 185 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 LRRC29Q8WV35 223 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 SECTM1Q8WVN6 248 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 RND1Q92730 232 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 MOB3AQ96BX8 217 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 OR2V2Q96R30 315 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 CLEC4MQ9H2X3 399 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 SPACA1Q9HBV2 294 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 TAAR3PQ9P1P4 343 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 OR1A1Q9P1Q5 309 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 MBD2Q9UBB5 411 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 DYSFO75923 2080 aa10.74□□□□□ -0.69
VIPAS39-206ENST00000553888 CACNA1AO00555 2505 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 CRYM-AS1A6NIL9 109 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 RFPL4AA6NLU0 287 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 RFPL4AL1F8VTS6 287 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms