RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 STUB1Q9UNE7 303 aa11.79□□□□□ -0.52
CACNB3-220ENST00000551716 FAM90A10PA6NDY2 464 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 LY6G6CO95867 125 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 IL3RAP26951 378 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 CNTFRP26992 372 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 SLURP1P55000 103 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 CXCR4P61073 352 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 CDK5Q00535 292 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 ATXN7L3Q14CW9 347 aaPredicted RBP11.78□□□□□ -0.52
CACNB3-220ENST00000551716 Q6P435 159 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 HDXQ7Z353 690 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 CATSPERDQ86XM0 798 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 TTTY10Q9BZA0 68 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 TOLLIPQ9H0E2 274 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 PPIL3Q9H2H8 161 aaKnown RBP11.78□□□□□ -0.52
CACNB3-220ENST00000551716 ERGIC3Q9Y282 383 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 ALMS1Q8TCU4 4167 aa11.78□□□□□ -0.52
CACNB3-220ENST00000551716 FRAS1Q86XX4 4008 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 TXNL1O43396 289 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 KDM4BO94953 1096 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 IGLV1-51P01701 117 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 OCM2P0CE71 109 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 OCMP0CE72 109 aaPredicted RBP11.77□□□□□ -0.53
CACNB3-220ENST00000551716 PRDX6P30041 224 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 REG1BP48304 166 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 LTC4SQ16873 150 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 FAM53AQ6NSI3 398 aaPredicted RBP11.77□□□□□ -0.53
CACNB3-220ENST00000551716 SAXO1Q8IYX7 474 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 C8orf31Q8N9H6 132 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 TMEM104Q8NE00 496 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 OR13A1Q8NGR1 328 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 RFESDQ8TAC1 157 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 SPSB1Q96BD6 273 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 LRGUKQ96M69 825 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 KIF25Q9UIL4 384 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 WSB1Q9Y6I7 421 aa11.77□□□□□ -0.53
CACNB3-220ENST00000551716 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 ZNF670-ZNF695F2Z2N8 137 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 H0Y980 276 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 HSPB1P04792 205 aaKnown RBP11.76□□□□□ -0.53
CACNB3-220ENST00000551716 KRT8P05787 483 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 OSMP13725 252 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 ATF1P18846 271 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 GZMHP20718 246 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 F2RL1P55085 397 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 ODF4Q2M2E3 257 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 UTS2BQ765I0 119 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 LINC00311Q8N616 119 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 YIPF7Q8N8F6 280 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 RTN4IP1Q8WWV3 396 aaPredicted RBP11.76□□□□□ -0.53
CACNB3-220ENST00000551716 ZCCHC4Q9H5U6 513 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 ZNF556Q9HAH1 456 aa11.76□□□□□ -0.53
CACNB3-220ENST00000551716 TRAV41A0A0B4J266 112 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 A0A1W2PPE3 182 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 CCDC182A6NF36 153 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 MAGEB4O15481 346 aaPredicted RBP11.75□□□□□ -0.53
CACNB3-220ENST00000551716 RPP14O95059 124 aaKnown RBP11.75□□□□□ -0.53
CACNB3-220ENST00000551716 LGALS1P09382 135 aaKnown RBP11.75□□□□□ -0.53
CACNB3-220ENST00000551716 KCNJ3P48549 501 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 MNAT1P51948 309 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 PAX5Q02548 391 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 PLEKHG7Q6ZR37 379 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 GTSCR1Q86UQ5 136 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 SLC35F2Q8IXU6 374 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 OR52M1Q8NGK5 317 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 NEK6Q9HC98 313 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 TPSG1Q9NRR2 321 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 FAM118AQ9NWS6 357 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 CLN6Q9NWW5 311 aa11.75□□□□□ -0.53
CACNB3-220ENST00000551716 IGKV1-9A0A0C4DH69 117 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 IGKV1-12A0A0C4DH73 117 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 G3V318 75 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 IGKV1D-12P01611 117 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 FAM98BQ52LJ0 330 aaKnown RBP11.74□□□□□ -0.53
CACNB3-220ENST00000551716 PAN3Q58A45 887 aaKnown RBP11.74□□□□□ -0.53
CACNB3-220ENST00000551716 RNLSQ5VYX0 342 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 RDH10Q8IZV5 341 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 MINDY2Q8NBR6 621 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 MRGPRDQ8TDS7 321 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 OPALINQ96PE5 141 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 MBOAT4Q96T53 435 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 TMED9Q9BVK6 235 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 ALX4Q9H161 411 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-220ENST00000551716 TVP23BQ9NYZ1 205 aa11.74□□□□□ -0.53
CACNB3-220ENST00000551716 H2AFY2Q9P0M6 372 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-220ENST00000551716 IGHV4OR15-8A0A075B7B6 117 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 A0A087WW49 117 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 H0YJX3 145 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 UBCP0CG48 685 aaKnown RBP11.73□□□□□ -0.53
CACNB3-220ENST00000551716 DBTP11182 482 aaKnown RBP11.73□□□□□ -0.53
CACNB3-220ENST00000551716 TNCP24821 2201 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 CDK5R1Q15078 307 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 Q3ZCU0 254 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 FAHD1Q6P587 224 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 CYP2R1Q6VVX0 501 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 RSRP1Q9BUV0 290 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 HIPK2Q9H2X6 1198 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 SLC25A19Q9HC21 320 aa11.73□□□□□ -0.53
CACNB3-220ENST00000551716 RYR1P21817 5038 aa11.72□□□□□ -0.53
CACNB3-220ENST00000551716 ZNF736B4DX44 427 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms