RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 SRSF7Q16629 238 aaKnown RBP eCLIP10.04□□□□□ -0.8
ERBB3-216ENST00000550869 PYDC2Q56P42 97 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 NKAPLQ5M9Q1 402 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 RSBN1Q5VWQ0 802 aaPredicted RBP10.04□□□□□ -0.8
ERBB3-216ENST00000550869 ZNF880Q6PDB4 577 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 Q6ZPA2 131 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 DCDC5Q6ZRR9 648 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 PEG10Q86TG7 708 aaKnown RBP10.04□□□□□ -0.8
ERBB3-216ENST00000550869 MUC20Q8N307 709 aaPredicted RBP10.04□□□□□ -0.8
ERBB3-216ENST00000550869 Q8N402 240 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 BPIFB2Q8N4F0 458 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 DEFB108BQ8NET1 73 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 OR4S1Q8NGB4 309 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 OR52I2Q8NH67 350 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 RAB1CQ92928 201 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 GCDHQ92947 438 aaPredicted RBP10.04□□□□□ -0.8
ERBB3-216ENST00000550869 MED30Q96HR3 178 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 RIMS4Q9H426 269 aaPredicted RBP10.04□□□□□ -0.8
ERBB3-216ENST00000550869 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
ERBB3-216ENST00000550869 A0A1B0GW55 424 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 LANCL1O43813 399 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 ORC5O43913 435 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 TK1P04183 234 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DUX4L2P0CJ85 424 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DUX4L3P0CJ86 424 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DUX4L4P0CJ87 422 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DUX4L5P0CJ88 424 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DUX4L6P0CJ89 424 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DUX4L7P0CJ90 424 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DTYMKP23919 212 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 ERP29P30040 261 aaKnown RBP10.03□□□□□ -0.8
ERBB3-216ENST00000550869 GABRA2P47869 451 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 GUCA2AQ02747 115 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 CR1LQ2VPA4 569 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 KRTAP24-1Q3LI83 254 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 PAN3Q58A45 887 aaKnown RBP10.03□□□□□ -0.8
ERBB3-216ENST00000550869 FAM120AOSQ5T036 256 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 SLC35E4Q6ICL7 350 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DUX4L9Q6RFH8 374 aaPredicted RBP10.03□□□□□ -0.8
ERBB3-216ENST00000550869 LYPD2Q6UXB3 125 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 ZNF841Q6ZN19 808 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 ZNF497Q6ZNH5 498 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 Q6ZS49 121 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 OR8H2Q8N162 312 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 ZNRF1Q8ND25 227 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 OR5D13Q8NGL4 314 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 PPP1R35Q8TAP8 253 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 PLPPR1Q8TBJ4 325 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 NUDCD2Q8WVJ2 157 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 FCAMRQ8WWV6 532 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DYRK2Q92630 601 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 BORCS5Q969J3 196 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 MSI2Q96DH6 328 aaKnown RBP10.03□□□□□ -0.8
ERBB3-216ENST00000550869 TIMD4Q96H15 378 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 COQ2Q96H96 371 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 CCL13Q99616 98 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 CMSS1Q9BQ75 279 aaKnown RBP10.03□□□□□ -0.8
ERBB3-216ENST00000550869 THAP7Q9BT49 309 aaPredicted RBP10.03□□□□□ -0.8
ERBB3-216ENST00000550869 CHST6Q9GZX3 395 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 CTSZQ9UBR2 303 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 DUX4Q9UBX2 424 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 KLK11Q9UBX7 282 aa10.03□□□□□ -0.8
ERBB3-216ENST00000550869 ZNF107Q9UII5 783 aaPredicted RBP10.03□□□□□ -0.8
ERBB3-216ENST00000550869 UBE2QL1A1L167 161 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 CEACAM18A8MTB9 384 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 F5H0A9 414 aaPredicted RBP10.02□□□□□ -0.81
ERBB3-216ENST00000550869 MGST3O14880 152 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 PPIHO43447 177 aaKnown RBP10.02□□□□□ -0.81
ERBB3-216ENST00000550869 UPK1BO75841 260 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 RBBP9O75884 186 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 MT-ND4P03905 459 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 WNT2P09544 360 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 IL7P13232 177 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 SELLP14151 372 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 CBX5P45973 191 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 GPR6P46095 362 aaPredicted RBP10.02□□□□□ -0.81
ERBB3-216ENST00000550869 GNG2P59768 71 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 IL13RA1P78552 427 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 SLC36A1Q7Z2H8 476 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 MRPL30Q8TCC3 161 aaKnown RBP10.02□□□□□ -0.81
ERBB3-216ENST00000550869 HDHD3Q9BSH5 251 aaPredicted RBP10.02□□□□□ -0.81
ERBB3-216ENST00000550869 C19orf24Q9BVV8 132 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 PPA2Q9H2U2 334 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 PALMDQ9NP74 551 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 MBNL3Q9NUK0 354 aaKnown RBP10.02□□□□□ -0.81
ERBB3-216ENST00000550869 ETAA1Q9NY74 926 aa10.02□□□□□ -0.81
ERBB3-216ENST00000550869 IGHV4-61A0A0C4DH41 118 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 NKX6-3A6NJ46 265 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 HSPB6O14558 160 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 TMPRSS2O15393 492 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 FCGR3AP08637 254 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 CD3GP09693 182 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 GDNFP39905 211 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 ARFRP1Q13795 201 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 GRK1Q15835 563 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 AVPI1Q5T686 147 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 TRAPPC6BQ86SZ2 158 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 HOGA1Q86XE5 327 aa10.01□□□□□ -0.81
ERBB3-216ENST00000550869 LYSMD2Q8IV50 215 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms