RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ZNF565Q8N9K5 539 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 CNIH3Q8TBE1 160 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 C4orf36Q96KX1 117 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 PRR25Q96S07 402 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 ZNF581Q9P0T4 197 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 OAZ3Q9UMX2 235 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 DYNC2H1Q8NCM8 4307 aaKnown RBP12.12□□□□□ -0.47
RAB5C-205ENST00000550013 HUWE1Q7Z6Z7 4374 aaKnown RBP12.11□□□□□ -0.47
RAB5C-205ENST00000550013 IGHV3-72A0A0B4J1Y9 119 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 SAC3D1A6NKF1 404 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 NPIPB11E5RHQ5 1161 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
RAB5C-205ENST00000550013 NHLRC4P0CG21 123 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-205ENST00000550013 DBTP11182 482 aaKnown RBP12.11□□□□□ -0.47
RAB5C-205ENST00000550013 C21orf33P30042 268 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-205ENST00000550013 REG1BP48304 166 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 FOXRED2Q8IWF2 684 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 OR10X1Q8NGY0 326 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 HAVCR2Q8TDQ0 301 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 NCOR1P1Q9H4R4 102 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 DCLRE1BQ9H816 532 aa12.11□□□□□ -0.47
RAB5C-205ENST00000550013 ZMAT5Q9UDW3 170 aaKnown RBP12.11□□□□□ -0.47
RAB5C-205ENST00000550013 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
RAB5C-205ENST00000550013 HSD17B6O14756 317 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 SULT1B1O43704 296 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 GPR12P47775 334 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 ELP2Q6IA86 826 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 MOB3BQ86TA1 216 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 ACBD7Q8N6N7 88 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 OR10K1Q8NGX5 313 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-205ENST00000550013 BARHL1Q9BZE3 327 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 IMPAD1Q9NX62 359 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 AASSQ9UDR5 926 aa12.1□□□□□ -0.47
RAB5C-205ENST00000550013 IGHV1-3A0A0C4DH29 117 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 NCBP2LA6PVI3 153 aaKnown RBP12.09□□□□□ -0.47
RAB5C-205ENST00000550013 AP4M1O00189 453 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 CCRL2O00421 344 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 GABRPO00591 440 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 RAMP3O60896 148 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 FCGR1AP12314 374 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-205ENST00000550013 EBI3Q14213 229 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 IL13RA2Q14627 380 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 FAM53AQ6NSI3 398 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-205ENST00000550013 TEX38Q6PEX7 206 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 LHFPL3Q86UP9 236 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 SERPINA12Q8IW75 414 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 PARP16Q8N5Y8 322 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 Q8N6K4 173 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 PXT1Q8NFP0 134 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 OR5D14Q8NGL3 314 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 TNFAIP8L1Q8WVP5 186 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 RBMXL1Q96E39 390 aaKnown RBP12.09□□□□□ -0.47
RAB5C-205ENST00000550013 ASCL2Q99929 193 aa12.09□□□□□ -0.47
RAB5C-205ENST00000550013 ISG20L2Q9H9L3 353 aaKnown RBP12.09□□□□□ -0.47
RAB5C-205ENST00000550013 DNAH7Q8WXX0 4024 aa12.08□□□□□ -0.47
RAB5C-205ENST00000550013 E9PI62 339 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 ZFPL1O95159 310 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 GP2P55259 537 aaKnown RBP12.08□□□□□ -0.48
RAB5C-205ENST00000550013 PAX5Q02548 391 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 GPR50Q13585 617 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 PNLIPRP3Q17RR3 467 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 CXorf66Q5JRM2 361 aaPredicted RBP12.08□□□□□ -0.48
RAB5C-205ENST00000550013 SLC16A12Q6ZSM3 486 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 SATL1Q86VE3 508 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 TGIF2LXQ8IUE1 241 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 IZUMO1Q8IYV9 350 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 Q8N9W7 124 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 OR51A2Q8NGJ7 313 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 UBALD1Q8TB05 177 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 TRUB1Q8WWH5 349 aaKnown RBP12.08□□□□□ -0.48
RAB5C-205ENST00000550013 LGALS12Q96DT0 336 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 CENPNQ96H22 339 aaPredicted RBP12.08□□□□□ -0.48
RAB5C-205ENST00000550013 PDCD1LG2Q9BQ51 273 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 ALG8Q9BVK2 526 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 FAM192AQ9GZU8 254 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 ABCG5Q9H222 651 aa12.08□□□□□ -0.48
RAB5C-205ENST00000550013 EXOGQ9Y2C4 368 aaKnown RBP12.08□□□□□ -0.48
RAB5C-205ENST00000550013 HTR3BO95264 441 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 GAPDHP04406 335 aaKnown RBP12.07□□□□□ -0.48
RAB5C-205ENST00000550013 ECI1P42126 302 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 SNRPGP62308 76 aaKnown RBP12.07□□□□□ -0.48
RAB5C-205ENST00000550013 KIR2DS1Q14954 304 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 SLC25A30Q5SVS4 291 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 C9orf66Q5T8R8 295 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 C1orf146Q5VVC0 180 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 SUMF2Q8NBJ7 301 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 TSEN15Q8WW01 171 aaKnown RBP12.07□□□□□ -0.48
RAB5C-205ENST00000550013 GPER1Q99527 375 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 DPCDQ9BVM2 203 aaPredicted RBP12.07□□□□□ -0.48
RAB5C-205ENST00000550013 PLSCR3Q9NRY6 295 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 LIN7CQ9NUP9 197 aaKnown RBP12.07□□□□□ -0.48
RAB5C-205ENST00000550013 SCOCQ9UIL1 159 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 DHDHQ9UQ10 334 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms