RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 TEX37Q96LM6 180 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 CCDC115Q96NT0 180 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 RBM14Q96PK6 669 aaKnown RBP1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 OR4C12Q96R67 309 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 GPR22Q99680 433 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 PAXXQ9BUH6 204 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 HCAR1Q9BXC0 346 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 OR2H1Q9GZK4 316 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 Q9HAA7 133 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 MEAF6Q9HAF1 191 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 SIAEQ9HAT2 523 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 POLE3Q9NRF9 147 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 C1orf123Q9NWV4 160 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 PTTG3PQ9NZH4 202 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 ACTR3BQ9P1U1 418 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 NDUFAF1Q9Y375 327 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 WDR45Q9Y484 360 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 HILPDAQ9Y5L2 63 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
DEPDC4-204ENST00000547823 TRAV36DV7A0A075B6V5 113 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 IGHV3OR16-12A0A075B7B8 117 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 IGHV3-35A0A0C4DH35 117 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C13orf42A0A1B0GVH6 325 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 IGLL5B9A064 214 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 H0Y980 276 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 M0QZK8 103 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 LGALS9O00182 355 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PLPP3O14495 311 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PIAS1O75925 651 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 IGHG2P01859 326 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 TFF1P04155 84 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 IFNA4P05014 189 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 RPS17P08708 135 aaKnown RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 GKN3PP0CG01 181 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PGA4P0DJD7 388 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PGA3P0DJD8 388 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 IGHV1-8P0DP01 117 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 HSD17B1P14061 328 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 MUC1P15941 1255 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 ZNF823P16415 610 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 RPS4Y1P22090 263 aaKnown RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 CRABP2P29373 138 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 HMOX2P30519 316 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 CAV3P56539 151 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 COPZ1P61923 177 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PITPNAQ00169 270 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 RUNX1Q01196 453 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PUDPQ08623 228 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C2orf54Q08AI8 447 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 FUT5Q11128 374 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SGCAQ16586 387 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 HIST3H3Q16695 136 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 MICBQ29980 383 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 CNPY1Q3B7I2 92 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C10orf128Q5T292 105 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 MRPL2Q5T653 305 aaKnown RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C1orf134Q5TEV5 83 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 MINOS1Q5TGZ0 78 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 STUMQ69YW2 141 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C8orf74Q6P047 294 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C1orf94Q6P1W5 598 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SASS6Q6UVJ0 657 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C5orf46Q6UWT4 87 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SLC35D2Q76EJ3 337 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C16orf62Q7Z3J2 963 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 NET1Q7Z628 596 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SPATA12Q7Z6I5 190 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 RANBP3LQ86VV4 465 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 CENPLQ8N0S6 344 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PGAM4Q8N0Y7 254 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 OR11H6Q8NGC7 330 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 OR5AK3PQ8NH89 298 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PSMA8Q8TAA3 256 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SFXN5Q8TD22 340 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 OR5P2Q8WZ92 322 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 RGP1Q92546 391 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 DLX4Q92988 240 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SLC38A4Q969I6 547 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 FAM46BQ96A09 425 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 C12orf43Q96C57 262 aaKnown RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 ROPN1LQ96C74 230 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 RASD2Q96D21 266 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SEH1LQ96EE3 360 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 PHYHIPLQ96FC7 376 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SLC25A44Q96H78 314 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 GAFA1Q96PS6 74 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 BPIFA3Q9BQP9 254 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 DNTTIP1Q9H147 329 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 REEP4Q9H6H4 257 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 RNPEPL1Q9HAU8 725 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 ELL3Q9HB65 397 aaPredicted RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 SLC25A19Q9HC21 320 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 MRPL39Q9NYK5 338 aaKnown RBP1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 P2RX2Q9UBL9 471 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 ZNF391Q9UJN7 358 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 HHLA2Q9UM44 414 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 CHMP2BQ9UQN3 213 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 UGT2A1Q9Y4X1 527 aa1.53□□□□□ -2.16
DEPDC4-204ENST00000547823 TIMM10BQ9Y5J6 103 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms