RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	MAFA	Q8NHW3	353 aa	Predicted RBP	11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	OR2H1	Q9GZK4	316 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF665	Q9H7R5	613 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	CRIM1	Q9NZV1	1036 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	SIT1	Q9Y3P8	196 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	NPIPB13	A6NJU9	1138 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	NPIPB4	C9JG80	1138 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	CD63	P08962	238 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	S100G	P29377	79 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	ALDH3B1	P43353	468 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	PMP22	Q01453	160 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	IL15RA	Q13261	267 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	HMGN3	Q15651	99 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	OR2T2	Q6IF00	324 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF100	Q8IYN0	542 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	MSI2	Q96DH6	328 aa	Known RBP	11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	SPIN2A	Q99865	258 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	SPIN2B	Q9BPZ2	258 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	SLC25A31	Q9H0C2	315 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	FAM234A	Q9H0X4	552 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	LOC102725191	A0A1B0GVB3	256 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	ARGFX	A6NJG6	315 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	CD300LB	A8K4G0	201 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	CELA3A	P09093	270 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	CCL1	P22362	96 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	DMBX1	Q8NFW5	382 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF251	Q9BRH9	671 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	TM2D1	Q9BX74	207 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	PLEKHF2	Q9H8W4	249 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	GLRX2	Q9NS18	164 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	GAB2	Q9UQC2	676 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	TMED3	Q9Y3Q3	217 aa		11.19	□□□□□ -0.62
BRF1-210	ENST00000547374	C5orf52	A6NGY3	159 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	PROB1	E7EW31	1015 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	S100A8	P05109	93 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	OR8U8	P0C7N1	319 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	ECI1	P42126	302 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	RBM11	P57052	281 aa	Known RBP	11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	WDR25	Q64LD2	544 aa	Predicted RBP	11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	WDR5B	Q86VZ2	330 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	LRP11	Q86VZ4	500 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	CPEB3	Q8NE35	698 aa	Known RBP	11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	SDSL	Q96GA7	329 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	DUSP23	Q9BVJ7	150 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	WNT5B	Q9H1J7	359 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	NDUFS6	O75380	124 aa	Known RBP	11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	GRP	P07492	148 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	PSG2	P11465	335 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	CA6	P23280	308 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	TUSC5	Q8IXB3	177 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	BOD1	Q96IK1	185 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	DOK5	Q9P104	306 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	CACNG5	Q9UF02	275 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	TUBD1	Q9UJT1	453 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	TRAPPC2L	Q9UL33	140 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	PQLC2L	A1A4F0	135 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	DEFA4	P12838	97 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	IL13RA2	Q14627	380 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	CPT1C	Q8TCG5	803 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	SNX22	Q96L94	193 aa		11.18	□□□□□ -0.62
BRF1-210	ENST00000547374	SYNGR3	O43761	229 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	CLDN1	O95832	211 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	UMOD	P07911	640 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	CXCL1	P09341	107 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	RAC3	P60763	192 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	SPEM1	Q8N4L4	309 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF383	Q8NA42	475 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	POMT1	Q9Y6A1	747 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	GJE1	A6NN92	205 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	KRAS	P01116	189 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	PDGFB	P01127	241 aa	Predicted RBP	11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	C10orf91	Q5T1B1	145 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	SPNS3	Q6ZMD2	512 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	OR10J5	Q8NHC4	309 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	MOB3A	Q96BX8	217 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	THOC3	Q96J01	351 aa	Known RBP	11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	CHRNA10	Q9GZZ6	450 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	LRP4	O75096	1905 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	TRDC	B7Z8K6	153 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	PPP1R2P9	O14990	202 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	RAB1A	P62820	205 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	PLP2	Q04941	152 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	WFIKKN1	Q96NZ8	548 aa		11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF552	Q9H707	407 aa	Predicted RBP	11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	STRAP	Q9Y3F4	350 aa	Known RBP	11.17	□□□□□ -0.62
BRF1-210	ENST00000547374	IGLV3-12	A0A075B6K2	115 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	IGHV1-45	A0A0A0MS14	117 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	TMEM50A	O95807	157 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	TFF1	P04155	84 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	CYB561	P49447	251 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	RAB5C	P51148	216 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	TRIM61	Q5EBN2	209 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	ZNF787	Q6DD87	383 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	VSIR	Q9H7M9	311 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	GPR35	Q9HC97	309 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	HNF1A	P20823	631 aa		11.16	□□□□□ -0.62
BRF1-210	ENST00000547374	FIP1L1	Q6UN15	594 aa	Known RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms