RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF565Q8N9K5 539 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 DYRK2Q92630 601 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 GCDHQ92947 438 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 COQ2Q96H96 371 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 ZNF286AQ9HBT8 521 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 KCNIP1Q9NZI2 227 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 CTSZQ9UBR2 303 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 KIF25Q9UIL4 384 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 CRYBG3Q68DQ2 2970 aa13.16□□□□□ -0.3
TRAFD1-203ENST00000547063 TRBV23-1A0A0A0MS06 115 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 hADV38S2A0JD32 116 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 ODAMA1E959 279 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 UPK1BO75841 260 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 SELLP14151 372 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 NAT1P18440 290 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 GZMHP20718 246 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 DCTN2Q13561 401 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 ACTBL2Q562R1 376 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 CD276Q5ZPR3 534 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 BEST4Q8NFU0 473 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 SETD6Q8TBK2 473 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 TRIM63Q969Q1 353 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 HDHD3Q9BSH5 251 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 ST6GALNAC5Q9BVH7 336 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 Q9N2K0 584 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 ING3Q9NXR8 418 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 KLK11Q9UBX7 282 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 ANAPC10Q9UM13 185 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 NAV2Q8IVL1 2488 aa13.15□□□□□ -0.3
TRAFD1-203ENST00000547063 TRGV10A0A0A0MS01 117 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 A0A1B0GW55 424 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 A0A1W2PPH5 198 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 MEIS3P1A6NDR6 274 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 IGHV2-5P01817 119 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 DUX4L2P0CJ85 424 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 DUX4L3P0CJ86 424 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 DUX4L4P0CJ87 422 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 DUX4L5P0CJ88 424 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 DUX4L6P0CJ89 424 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 DUX4L7P0CJ90 424 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 FAUP35544 74 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 GLIPR1P48060 266 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 TAS2R46P59540 309 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 TAS2R19P59542 299 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 GNB2P62879 340 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 RPL31P62899 125 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 BAK1Q16611 211 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 WDR25Q64LD2 544 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 ZNF57Q68EA5 555 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 ZNF880Q6PDB4 577 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 DUX4L9Q6RFH8 374 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 ZNF841Q6ZN19 808 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 TMEM229BQ8NBD8 167 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 OR4K15Q8NH41 348 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 H1FXQ92522 213 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 SSBP3Q9BWW4 388 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 NARFLQ9H6Q4 476 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 ABCB10Q9NRK6 738 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 DUX4Q9UBX2 424 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 OPN4Q9UHM6 478 aa13.14□□□□□ -0.31
TRAFD1-203ENST00000547063 UNC79Q9P2D8 2635 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 IGHV4-30-2A0A087WSY4 118 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 ANKRD20A5PA0PJZ0 165 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 CENPXA8MT69 81 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 ZNF736B4DX44 427 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 TRDCB7Z8K6 153 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 DEFA1P59665 94 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 DEFA3P59666 94 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 DYRK1AQ13627 763 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 CHRFAM7AQ494W8 412 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 Q5PR19 223 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 CLDND2Q8NHS1 167 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 CORO2AQ92828 525 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 COX4I2Q96KJ9 171 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 DMRTB1Q96MA1 342 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 FOXC2Q99958 501 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 C7orf50Q9BRJ6 194 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 ZNF230Q9UIE0 474 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 ANXA10Q9UJ72 324 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 UBE2J1Q9Y385 318 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 LINC00312Q9Y6C7 94 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 CELSR2Q9HCU4 2923 aa13.13□□□□□ -0.31
TRAFD1-203ENST00000547063 DOCK11Q5JSL3 2073 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 A0A1W2PQ09 198 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 SPINT2O43291 252 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 LANCL1O43813 399 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 DIRAS3O95661 229 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 CTXN2P0C2S0 81 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 USF1P22415 310 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 GLP1RP43220 463 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 OR3A3P47888 321 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 ARPC4P59998 168 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 LMO4P61968 165 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 MEF2DQ14814 521 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 CR1LQ2VPA4 569 aa13.12□□□□□ -0.31
TRAFD1-203ENST00000547063 TPRX1Q8N7U7 411 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms