RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CD59P13987 128 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 CHRNA7P36544 502 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 RPL29P47914 159 aaKnown RBP7.55□□□□□ -1.2
CLIP1-218ENST00000545889 PDLIM4P50479 330 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 ELLP55199 621 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-218ENST00000545889 LRP11Q86VZ4 500 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 TGIF2LYQ8IUE0 185 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 FAM26EQ8N5C1 309 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 FAM212BQ9NTI7 297 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-218ENST00000545889 DOCK10Q96BY6 2186 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 A0A0B4J2E0 115 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 A0A1B0GX12 115 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 MT-ND4LP03901 98 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF260Q3ZCT1 412 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF385CQ66K41 422 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-218ENST00000545889 FAHD1Q6P587 224 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 TMEM91Q6ZNR0 172 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 MOB1BQ7L9L4 216 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 CCDC168Q8NDH2 2452 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 OR6X1Q8NH79 312 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 MRGPRDQ8TDS7 321 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 COL25A1Q9BXS0 654 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-218ENST00000545889 GABARAPL3Q9BY60 117 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF665Q9H7R5 613 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 PITPNC1Q9UKF7 332 aa7.55□□□□□ -1.2
CLIP1-218ENST00000545889 LRRC3CA6NJW4 275 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 CDIPTO14735 213 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 COX7A2P2O60397 106 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 FCGR3BO75015 233 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 ADRA2AP08913 450 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 Q5PR19 223 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 FAM27D1Q5T7N8 215 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF660Q6AZW8 331 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-218ENST00000545889 UNQ6494/PRO21346Q6UXR6 183 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 DOLPP1Q86YN1 238 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 C9orf40Q8IXQ3 194 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 OR4D11Q8NGI4 311 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 NUDCD2Q8WVJ2 157 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 PERPQ96FX8 193 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 UCN2Q96RP3 112 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 AAMDCQ9H7C9 122 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 ICAM5Q9UMF0 924 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 NPTNQ9Y639 398 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 HS3ST3B1Q9Y662 390 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 TRDV1A0A1B0GX56 115 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 TGFBR3LH3BV60 316 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 LDLRAD4O15165 306 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 PF4V1P10720 104 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 HTN1P15515 57 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 MRPS11P82912 194 aaKnown RBP7.54□□□□□ -1.2
CLIP1-218ENST00000545889 LSM11P83369 360 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLIP1-218ENST00000545889 INPP5JQ15735 1006 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-218ENST00000545889 TMEM268Q5VZI3 342 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 OTOSQ8NHW6 89 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 OR4C12Q96R67 309 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 OR8B4Q96RC9 309 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 CLEC5AQ9NY25 188 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 FLRT3Q9NZU0 649 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 FOXJ2Q9P0K8 574 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 IGHV3-43A0A0B4J1X8 118 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 XKRY2A2RUG3 117 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 CCSO14618 274 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 TMEM127O75204 238 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 IGHV3-43DP0DP04 118 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 ACP1P24666 158 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 OR5I1Q13606 314 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 CD226Q15762 336 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 TNXAQ16473 311 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 C17orf82Q86X59 251 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-218ENST00000545889 VSTM2AQ8TAG5 236 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 SLC25A40Q8TBP6 338 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 ELOVL1Q9BW60 279 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 CNTNAP3Q9BZ76 1288 aa7.54□□□□□ -1.2
CLIP1-218ENST00000545889 LOC101059948A0A1B0GTJ6 334 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 DNPH1O43598 174 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 DHRS3O75911 302 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 SFTA3P0C7M3 94 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 EPXP11678 715 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 OPRK1P41145 380 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 GZMMP51124 257 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 NHLH2Q02577 135 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 LINC01560Q8TB33 94 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 FBLIM1Q8WUP2 373 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF764Q96H86 408 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-218ENST00000545889 SAMD10Q9BYL1 202 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 MRPL22Q9NWU5 206 aaKnown RBP7.53□□□□□ -1.2
CLIP1-218ENST00000545889 LRP12Q9Y561 859 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 TMEM129A0AVI4 362 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 SCGB1D1O95968 90 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 CEACAM6P40199 344 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 OR3A1P47881 315 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 PRSS12P56730 875 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
CLIP1-218ENST00000545889 UQCC3Q6UW78 93 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 TMEM147Q9BVK8 224 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 RABAC1Q9UI14 185 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 LOC102724200A0A096LPH7 203 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-218ENST00000545889 DCTN6O00399 190 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 MMP7P09237 267 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms