RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 SLC16A13Q7RTY0 426 aa13.08□□□□□ -0.32
CNN3-207ENST00000545882 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
CNN3-207ENST00000545882 ZFP62Q8NB50 900 aaPredicted RBP13.08□□□□□ -0.32
CNN3-207ENST00000545882 OR1J1Q8NGS3 322 aa13.08□□□□□ -0.32
CNN3-207ENST00000545882 MALSU1Q96EH3 234 aa13.08□□□□□ -0.32
CNN3-207ENST00000545882 TCFL5Q9UL49 500 aa13.08□□□□□ -0.32
CNN3-207ENST00000545882 A0A096LPE4 126 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 A0A1W2PPZ6 126 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 RBFOX3A6NFN3 312 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 TK1P04183 234 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 PAX9P55771 341 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 ZXDAP98168 799 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 ZNF266Q14584 549 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 C9orf135Q5VTT2 229 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 C1orf210Q8IVY1 113 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 ZNF565Q8N9K5 539 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 OR5C1Q8NGR4 320 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 PSMF1Q92530 271 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 ABHD14BQ96IU4 210 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 SPIN2AQ99865 258 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 SPIN2BQ9BPZ2 258 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 METTL1Q9UBP6 276 aaKnown RBP13.07□□□□□ -0.32
CNN3-207ENST00000545882 ATPIF1Q9UII2 106 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 B4E171 279 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 HSD17B6O14756 317 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 CCNOP22674 350 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 TSPAN7P41732 249 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 RPS23P62266 143 aaKnown RBP13.07□□□□□ -0.32
CNN3-207ENST00000545882 FABP9Q0Z7S8 132 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 C20orf204Q6ZNR8 217 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 TIPARPQ7Z3E1 657 aaKnown RBP13.07□□□□□ -0.32
CNN3-207ENST00000545882 OR8G5Q8NG78 346 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 SLC25A31Q9H0C2 315 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 SMDT1Q9H4I9 107 aa13.07□□□□□ -0.32
CNN3-207ENST00000545882 NOSIPQ9Y314 301 aaKnown RBP13.07□□□□□ -0.32
CNN3-207ENST00000545882 ZNF732B4DXR9 585 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 HSPB6O14558 160 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 SS18L1O75177 396 aaPredicted RBP13.06□□□□□ -0.32
CNN3-207ENST00000545882 MRPL33O75394 65 aaKnown RBP13.06□□□□□ -0.32
CNN3-207ENST00000545882 CST7O76096 145 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 NXPH3O95157 252 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 SLC34A2O95436 690 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 HLA-HP01893 362 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 S100A6P06703 90 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 SRP19P09132 144 aaKnown RBP13.06□□□□□ -0.32
CNN3-207ENST00000545882 ZNF14P17017 642 aaPredicted RBP13.06□□□□□ -0.32
CNN3-207ENST00000545882 RAB1AP62820 205 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 HAGHQ16775 308 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 CEACAM21Q3KPI0 293 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 HIKESHIQ53FT3 197 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 SOHLH1Q5JUK2 328 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 ADAM5Q6NVV9 412 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 PCSK4Q6UW60 755 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 SUMF2Q8NBJ7 301 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 LINC00470Q9BZP3 86 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
CNN3-207ENST00000545882 TAAR3PQ9P1P4 343 aa13.06□□□□□ -0.32
CNN3-207ENST00000545882 PUS1Q9Y606 427 aaKnown RBP eCLIP13.06□□□□□ -0.32
CNN3-207ENST00000545882 A0A0G2JRQ6 117 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 DUXBA0A1W2PPF3 345 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 C3orf80F5H4A9 247 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 SLC33A1O00400 549 aaPredicted RBP13.05□□□□□ -0.32
CNN3-207ENST00000545882 SYNGR1O43759 233 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 S100A8P05109 93 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 OR8U8P0C7N1 319 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 SMIM6P0DI80 62 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 VDAC1P21796 283 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 ACP1P24666 158 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 CYB561P49447 251 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 RUNX1Q01196 453 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 SPINK14Q6IE38 97 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 ZDHHC23Q8IYP9 409 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 ZNF295-AS1Q8N0V1 137 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 MRPL30Q8TCC3 161 aaKnown RBP13.05□□□□□ -0.32
CNN3-207ENST00000545882 RNF115Q9Y4L5 304 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 ATP23Q9Y6H3 246 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 C5orf49A4QMS7 147 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 CHST1O43916 411 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 NGFP01138 241 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 CELA3AP09093 270 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 MMP9P14780 707 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 VAMP2P63027 116 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 MPV17LQ2QL34 196 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 IL22RA1Q8N6P7 574 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 CT55Q8WUE5 264 aa13.05□□□□□ -0.32
CNN3-207ENST00000545882 ZNF552Q9H707 407 aaPredicted RBP13.05□□□□□ -0.32
CNN3-207ENST00000545882 TNFSF12O43508 249 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 PGLYRP1O75594 196 aaPredicted RBP13.04□□□□□ -0.32
CNN3-207ENST00000545882 SERPINA7P05543 415 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 CEACAM1P13688 526 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 SPINK2P20155 84 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 LHX2P50458 406 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 SRYQ05066 204 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 ZNF154Q13106 437 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 ICAM4Q14773 271 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 RNPS1Q15287 305 aaKnown RBP13.04□□□□□ -0.32
CNN3-207ENST00000545882 TUSC5Q8IXB3 177 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 TMEM217Q8N7C4 229 aa13.04□□□□□ -0.32
CNN3-207ENST00000545882 OR5D13Q8NGL4 314 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms