RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 BCO1Q9HAY6 547 aa16.18■□□□□ 0.18
MSLN-202ENST00000545450 FAM24AA6NFZ4 105 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 SPRY1O43609 319 aaPredicted RBP16.17■□□□□ 0.18
MSLN-202ENST00000545450 PITX3O75364 302 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 VAMP5O95183 116 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 DBHP09172 617 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 RD3LP0DJH9 198 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 HAGHQ16775 308 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 SLC22A25Q6T423 547 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 ZNF610Q8N9Z0 462 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 Q8WTZ3 238 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 TMEM54Q969K7 222 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 TTTY12Q9BZ98 90 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 NCOA6Q14686 2063 aaPredicted RBP16.17■□□□□ 0.18
MSLN-202ENST00000545450 AKAP13Q12802 2813 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 IGKV1-27A0A075B6S5 117 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 FAM166BA8MTA8 275 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 NPIPA2E9PIF3 369 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 NPIPA3F8WFD2 350 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 CDS2O95674 445 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 CXCL1P09341 107 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 SNAI3Q3KNW1 292 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 CCDC71LQ8N9Z2 235 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 ZFP62Q8NB50 900 aaPredicted RBP16.17■□□□□ 0.18
MSLN-202ENST00000545450 DYRK2Q92630 601 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 TP53RKQ96S44 253 aa16.17■□□□□ 0.18
MSLN-202ENST00000545450 IGSF23A1L1A6 192 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 CXorf65A6NEN9 183 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 ZNF724A8MTY0 619 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 DNPH1O43598 174 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 CXCL13O43927 109 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 SP1P08047 785 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 CARD18P57730 90 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 UBE2KP61086 200 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 ZIC4Q8N9L1 334 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 OR10AD1Q8NGE0 317 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 OR10D3Q8NH80 312 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 SLAMF9Q96A28 289 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 PTPRZ1P23471 2315 aaPredicted RBP16.16■□□□□ 0.18
MSLN-202ENST00000545450 GPX4P36969 197 aaPredicted RBP16.16■□□□□ 0.18
MSLN-202ENST00000545450 MAGEA5P43359 124 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 SOX8P57073 446 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 DLK1P80370 383 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 ZNF343Q6P1L6 599 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 C20orf196Q8IYI0 205 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 ZNF383Q8NA42 475 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 OR2V1Q8NHB1 315 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 ZNF552Q9H707 407 aaPredicted RBP16.16■□□□□ 0.18
MSLN-202ENST00000545450 ZNF286AQ9HBT8 521 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 SIRT7Q9NRC8 400 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 B4GALT7Q9UBV7 327 aa16.16■□□□□ 0.18
MSLN-202ENST00000545450 FAM230AA0A1W2PPH8 454 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 NKX2-6A6NCS4 301 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 SEC14L6B5MCN3 397 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 H0YL77 283 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 HSPB1P04792 205 aaKnown RBP16.15■□□□□ 0.18
MSLN-202ENST00000545450 ERVFRD-1P60508 538 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 ICAM4Q14773 271 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 ZNF674Q2M3X9 581 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 CDPF1Q6NVV7 123 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 ZNF429Q86V71 674 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 TMEM123Q8N131 208 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 TMEM171Q8WVE6 324 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 SPTSSAQ969W0 71 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 HIPK2Q9H2X6 1198 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 PLEKHF2Q9H8W4 249 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 LIPGQ9Y5X9 500 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 FRYQ5TBA9 3013 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 MYO7BQ6PIF6 2116 aa16.15■□□□□ 0.18
MSLN-202ENST00000545450 FAM221AA4D161 298 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 TRDCB7Z8K6 153 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 RPL36A-HNRNPH2H7BZ11 118 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 GEMIN2O14893 280 aaKnown RBP16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BKO60814 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BJP06899 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BOP23527 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BBP33778 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 MEOX1P50221 254 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BDP58876 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BCP62807 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 SRPXP78539 464 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST2H2BEQ16778 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 ZNF506Q5JVG8 444 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.14■□□□□ 0.17
MSLN-202ENST00000545450 BRICD5Q6PL45 260 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 TMEM251Q8N6I4 163 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BHQ93079 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BNQ99877 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HIST1H2BMQ99879 126 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 PLEK2Q9NYT0 353 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 KLF13Q9Y2Y9 288 aaPredicted RBP16.14■□□□□ 0.17
MSLN-202ENST00000545450 C3orf85A0A1B0GTC6 90 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 ZNF732B4DXR9 585 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 PROB1E7EW31 1015 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 MPPED1O15442 326 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 HSPA12AO43301 675 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 SCAF4O95104 1147 aaKnown RBP16.14■□□□□ 0.17
MSLN-202ENST00000545450 AADACP22760 399 aa16.14■□□□□ 0.17
MSLN-202ENST00000545450 NKX2-1P43699 371 aaPredicted RBP16.14■□□□□ 0.17
MSLN-202ENST00000545450 SPNS3Q6ZMD2 512 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms