RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TRGV5A0A0B4J1U4 118 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CHEK1O14757 476 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 NPIPB7O75200 414 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MELTFP08582 738 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 ASCL1P50553 236 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 DLK1P80370 383 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 PSG4Q00888 419 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 ZNF92Q03936 586 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 NSUN5P2Q63ZY6 315 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 OR8G2PQ6IF36 304 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 WDR73Q6P4I2 378 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 OR10V1Q8NGI7 309 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 ANAPC16Q96DE5 110 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 TIMP4Q99727 224 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 PARP11Q9NR21 331 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 SLC2A9Q9NRM0 540 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 IGLV3-32A0A0A0MS00 114 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 C7orf77A4D0Y5 90 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 OR5H1A6NKK0 313 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 C21orf140B9A014 251 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 ZNF207O43670 478 aaKnown RBP5.04□□□□□ -1.6
VPS50-220ENST00000544910 LY86O95711 162 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CA6P23280 308 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 TMEM267Q0VDI3 215 aaPredicted RBP5.04□□□□□ -1.6
VPS50-220ENST00000544910 TSPO2Q5TGU0 170 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 ZADH2Q8N4Q0 377 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 TMEM37Q8WXS4 190 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 RAB24Q969Q5 203 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 PROCRQ9UNN8 238 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 NINQ8N4C6 2090 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 DUXBA0A1W2PPF3 345 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 PMS2P1A4D2B8 440 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CRYM-AS1A6NIL9 109 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 DHRS7CA6NNS2 312 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 H0Y8G0 127 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 SULT1A1P50225 295 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 UBE2G1P62253 170 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 LYRM7Q5U5X0 104 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 ARL6IP6Q8N6S5 226 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 OR10P1Q8NGE3 313 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 OR11L1Q8NGX0 322 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MUCL1Q96DR8 90 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MTCH1Q9NZJ7 389 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MPC1Q9Y5U8 109 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 TMEM30CPA0ZSE6 113 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 FAM24AA6NFZ4 105 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 OR5B21A6NL26 309 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 ABCD4O14678 606 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 CA11O75493 328 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 HKR1P10072 659 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 B2MP61769 119 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 NHLH2Q02577 135 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 Q96M66 194 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 FKBP11Q9NYL4 201 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 CLCF1Q9UBD9 225 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 GNG12Q9UBI6 72 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 TRAV14DV4A0A0A6YYC5 116 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 TEX50A0A1B0GTY4 177 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 hCG_1809904A0A1W2PP81 198 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 A0A1W2PR64 198 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 A0A1W2PRV1 198 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 RBFOX3A6NFN3 312 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 GCGP01275 180 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 PPYP01298 95 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 MBPP02686 304 aaPredicted RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 FGF2P09038 288 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 STAG3L2P0CL84 134 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 MPZP25189 248 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 RPL13AP40429 203 aaKnown RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 PLAC9Q5JTB6 97 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 Q6ZN92 141 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 RBMXL3Q8N7X1 1067 aaKnown RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 OR10A7Q8NGE5 316 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 CMTM2Q8TAZ6 248 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 FBXO17Q96EF6 278 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 TTTY12Q9BZ98 90 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 WDR13Q9H1Z4 485 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 GSX1Q9H4S2 264 aaPredicted RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 HEYLQ9NQ87 328 aaPredicted RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 HS3ST3B1Q9Y662 390 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 ACTL6AO96019 429 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 ACAA1P09110 424 aaPredicted RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 CFHR1Q03591 330 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 EDDM3AQ14507 147 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 UBE2V2Q15819 145 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 SPANXN5Q5MJ07 72 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 FAM219AQ8IW50 185 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 MTURNQ8N3F0 131 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 OR2C3Q8N628 320 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 GALMQ96C23 342 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 POM121Q96HA1 1249 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 OR10C1Q96KK4 312 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 AQP10Q96PS8 301 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 TM2D1Q9BX74 207 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 TAAR3PQ9P1P4 343 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 NAT8Q9UHE5 227 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 RCC1P18754 421 aaPredicted RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 P2RY4P51582 365 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 ZXDAP98168 799 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms