RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 IL22RA2Q969J5 263 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 WDYHV1Q96HA8 205 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 USB1Q9BQ65 265 aaKnown RBP5.6□□□□□ -1.51
PTPRO-208ENST00000542557 PLA2G2EQ9NZK7 142 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 PRSS50Q9UI38 385 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 ZDHHC8Q9ULC8 765 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 LHX6Q9UPM6 363 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 RCL1Q9Y2P8 373 aaKnown RBP5.6□□□□□ -1.51
PTPRO-208ENST00000542557 LIPGQ9Y5X9 500 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 FREM1Q5H8C1 2179 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 AHCTF1Q8WYP5 2266 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SHANK1Q9Y566 2161 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SLC22A20A6NK97 555 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 J3QT63 122 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SYNGR1O43759 233 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SPP1P10451 314 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 PRKACAP17612 351 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 UCP1P25874 307 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 ARHGDIBP52566 201 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 GNMTQ14749 295 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 C3AR1Q16581 482 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 DHRS13Q6UX07 377 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 TBC1D26Q86UD7 250 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SUMF2Q8NBJ7 301 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 MRPL30Q8TCC3 161 aaKnown RBP5.59□□□□□ -1.51
PTPRO-208ENST00000542557 BOD1Q96IK1 185 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 HS3ST6Q96QI5 342 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 CABLES2Q9BTV7 478 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SMIM3Q9BZL3 60 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 TLNRD1Q9H1K6 362 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 ZDHHC11Q9H8X9 412 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 IL36RNQ9UBH0 155 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 NDRG3Q9UGV2 375 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 TRGV5A0A0B4J1U4 118 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 FAM157AC9JC47 383 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 NPIPB11E5RHQ5 1161 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 H0Y980 276 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 RNASEK-C17orf49H0YIS7 233 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SLC34A2O95436 690 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SCTP09683 121 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 DANCRP0C864 163 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 MMP9P14780 707 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 CD82P27701 267 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 DVL1P1P54792 670 aaPredicted RBP5.59□□□□□ -1.51
PTPRO-208ENST00000542557 UCP2P55851 309 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 HTD2P86397 168 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 HAGHLQ6PII5 290 aaPredicted RBP5.59□□□□□ -1.51
PTPRO-208ENST00000542557 MEX3BQ6ZN04 569 aaKnown RBP5.59□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF818PQ6ZRF7 136 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.59□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF695Q8IW36 515 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 SELENOHQ8IZQ5 122 aaKnown RBP5.59□□□□□ -1.51
PTPRO-208ENST00000542557 BATF2Q8N1L9 274 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 TMEM178AQ8NBL3 297 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 FAM216AQ8WUB2 273 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 AIFM2Q9BRQ8 373 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 OR51I2Q9H344 312 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 TREM2Q9NZC2 230 aa5.59□□□□□ -1.51
PTPRO-208ENST00000542557 UBE2J1Q9Y385 318 aaPredicted RBP5.59□□□□□ -1.51
PTPRO-208ENST00000542557 STRAPQ9Y3F4 350 aaKnown RBP5.59□□□□□ -1.51
PTPRO-208ENST00000542557 IGKV1-6A0A0C4DH72 117 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 DEGS1O15121 323 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 HEXAP06865 529 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 SNRNP70P08621 437 aaKnown RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 ZNF806P0C7X5 589 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 PVALBP20472 110 aaPredicted RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 MDH2P40926 338 aaKnown RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 NKX2-1P43699 371 aaPredicted RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 HLA-DRB3P79483 266 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 FLI1Q01543 452 aaPredicted RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 EWSR1Q01844 656 aaKnown RBP eCLIP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 TBC1D28Q2M2D7 210 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 HIKESHIQ53FT3 197 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 NMSQ5H8A3 153 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 SHEQ5VZ18 495 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 PCSK4Q6UW60 755 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 MOB1BQ7L9L4 216 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 MDP1Q86V88 176 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 CMTM1Q8IZ96 169 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 FAM58AQ8N1B3 248 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 GAPTQ8N292 157 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 IL22RA1Q8N6P7 574 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 ZBTB34Q8NCN2 500 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 OR5D13Q8NGL4 314 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 NEK7Q8TDX7 302 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 SECTM1Q8WVN6 248 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 BSCL2Q96G97 398 aaPredicted RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 TMEM231Q9H6L2 316 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 WFDC1Q9HC57 220 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 TMEM9BQ9NQ34 198 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 SPRR3Q9UBC9 169 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 TRAV24A0A0B4J272 114 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 IGKV1D-13A0A0B4J2D9 117 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 NKX2-6A6NCS4 301 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 PITX3O75364 302 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 SFTA3P0C7M3 94 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 IGKV1-13P0DP09 117 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 VDAC1P21796 283 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 TNFSF4P23510 183 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 LMO1P25800 156 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms