RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 XRCC2O43543 280 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 NDUFA2O43678 99 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 ENSAO43768 121 aaKnown RBP6.48□□□□□ -1.37
MRPS35-204ENST00000542199 FCN3O75636 299 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 DUS4LO95620 317 aaKnown RBP6.48□□□□□ -1.37
MRPS35-204ENST00000542199 BAG2O95816 211 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 IFNGP01579 166 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 ZNF3P17036 446 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 DDOSTP39656 456 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 BPIFB3P59826 476 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 FGF12P61328 243 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 GRB2P62993 217 aaKnown RBP6.48□□□□□ -1.37
MRPS35-204ENST00000542199 FAM3AP98173 230 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
MRPS35-204ENST00000542199 TEX36Q5VZQ5 186 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 KCTD9Q7L273 389 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 CATSPERDQ86XM0 798 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 PRSS35Q8N3Z0 413 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 OR10G2Q8NGC3 310 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 OR6K6Q8NGW6 343 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 ASB9Q96DX5 294 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 CCT8L2Q96SF2 557 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 NIPSNAP1Q9BPW8 284 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 SLC5A7Q9GZV3 580 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 MARCH7Q9H992 704 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 CENPMQ9NSP4 180 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 C1orf123Q9NWV4 160 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 KAAG1Q9UBP8 84 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 SNX5Q9Y5X3 404 aa6.48□□□□□ -1.37
MRPS35-204ENST00000542199 NOTCH3Q9UM47 2321 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 TRAV38-1A0A0B4J264 116 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 hCG_38984A0A1B0GV85 526 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 C13orf42A0A1B0GVH6 325 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 MDFIC2A0A1B0GVS7 189 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 ZNF879B4DU55 563 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 SAP30O75446 220 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 GLCEO94923 617 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 FAM107AO95990 144 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 APOC1P02654 83 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 CALB2P22676 271 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 CFHR2P36980 270 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 CX3CR1P49238 355 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 OR8B8Q15620 311 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 MRGPRG-AS1Q2M3A8 158 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 DEFB112Q30KQ8 113 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 KLHL12Q53G59 568 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 DHRS11Q6UWP2 260 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 BRD3OSQ6XYD6 125 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 ZNF826PQ6ZT77 177 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 DPY19L4Q7Z388 723 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 WDR86Q86TI4 376 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 C11orf53Q8IXP5 236 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 OR52H1Q8NGJ2 320 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 TEX47Q8TBZ9 253 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 SGK3Q96BR1 496 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 REEP6Q96HR9 211 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 TECTBQ96PL2 329 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 TBX15Q96SF7 602 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 AMELYQ99218 206 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 CHID1Q9BWS9 393 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 TLNRD1Q9H1K6 362 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 C1orf21Q9H246 121 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 MED20Q9H944 212 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 ERVK-18Q9QC07 812 aa6.47□□□□□ -1.37
MRPS35-204ENST00000542199 PRPF19Q9UMS4 504 aaKnown RBP6.47□□□□□ -1.37
MRPS35-204ENST00000542199 A0A1W2PRV1 198 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 FAM183AA6NL82 134 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 ANKRD30BLA7E2S9 258 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 SRRM5B3KS81 715 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.46□□□□□ -1.38
MRPS35-204ENST00000542199 GYPAP02724 150 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 SFTPBP07988 381 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 CFL1P23528 166 aaKnown RBP6.46□□□□□ -1.38
MRPS35-204ENST00000542199 HSD11B1P28845 292 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 ZNF121P58317 390 aaPredicted RBP6.46□□□□□ -1.38
MRPS35-204ENST00000542199 EIF2B1Q14232 305 aaKnown RBP6.46□□□□□ -1.38
MRPS35-204ENST00000542199 GPR157Q5UAW9 335 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 C16orf87Q6PH81 154 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 WDR82Q6UXN9 313 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 COX8CQ7Z4L0 72 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 TMEM179BQ7Z7N9 219 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 ERI1Q8IV48 349 aaKnown RBP6.46□□□□□ -1.38
MRPS35-204ENST00000542199 TMEM86BQ8N661 226 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 CCDC197Q8NCU1 140 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 OR1M1Q8NGA1 313 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 OR6N2Q8NGY6 317 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 OTOSQ8NHW6 89 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 GIPC3Q8TF64 312 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 TAF15Q92804 592 aaKnown RBP eCLIP6.46□□□□□ -1.38
MRPS35-204ENST00000542199 CCDC124Q96CT7 223 aaKnown RBP6.46□□□□□ -1.38
MRPS35-204ENST00000542199 RGCCQ9H4X1 137 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 SP140LQ9H930 580 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 RNPEPL1Q9HAU8 725 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 TAS2R1Q9NYW7 299 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 ZNF319Q9P2F9 582 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 N6AMT1Q9Y5N5 214 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 MMP24Q9Y5R2 645 aa6.46□□□□□ -1.38
MRPS35-204ENST00000542199 A0A087WZ39 114 aa6.45□□□□□ -1.38
MRPS35-204ENST00000542199 CENPVL3A0A0U1RRI6 287 aa6.45□□□□□ -1.38
MRPS35-204ENST00000542199 H3BN98 237 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms