RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TMED3Q9Y3Q3 217 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 VSTM5A8MXK1 200 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 FABP9Q0Z7S8 132 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 ZNF528Q3MIS6 628 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 Q3ZCU0 254 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 SH3BGRL3Q9H299 93 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 ZNF581Q9P0T4 197 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 RCC2Q9P258 522 aaKnown RBP13.96□□□□□ -0.17
VARS2-212ENST00000542001 PRELID3BQ9Y3B1 194 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 HPP00738 406 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 SNRPCP09234 159 aaKnown RBP13.96□□□□□ -0.17
VARS2-212ENST00000542001 SPP1P10451 314 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 CYYR1Q96J86 154 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 DYNLRB1Q9NP97 96 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 PILRBQ9UKJ0 227 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 FRMPD3Q5JV73 1810 aa13.96□□□□□ -0.17
VARS2-212ENST00000542001 MBPP02686 304 aaPredicted RBP13.96□□□□□ -0.18
VARS2-212ENST00000542001 MPGP29372 298 aa13.96□□□□□ -0.18
VARS2-212ENST00000542001 GPR12P47775 334 aa13.96□□□□□ -0.18
VARS2-212ENST00000542001 ENDOGQ14249 297 aaKnown RBP13.96□□□□□ -0.18
VARS2-212ENST00000542001 PLGLAQ15195 96 aa13.96□□□□□ -0.18
VARS2-212ENST00000542001 CALHM1Q8IU99 346 aa13.96□□□□□ -0.18
VARS2-212ENST00000542001 TMEM251Q8N6I4 163 aa13.96□□□□□ -0.18
VARS2-212ENST00000542001 PHYHIPLQ96FC7 376 aa13.96□□□□□ -0.18
VARS2-212ENST00000542001 OR2D2Q9H210 308 aa13.96□□□□□ -0.18
VARS2-212ENST00000542001 PCDH15Q96QU1 1955 aa13.96□□□□□ -0.18
VARS2-212ENST00000542001 C7orf77A4D0Y5 90 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 DVL1P1P54792 670 aaPredicted RBP13.95□□□□□ -0.18
VARS2-212ENST00000542001 WFDC8Q8IUA0 241 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 OIT3Q8WWZ8 545 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 ANGPTL4Q9BY76 406 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 LRRK1Q38SD2 2015 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 RNF222A6NCQ9 220 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 ZIC3O60481 467 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 CST2P09228 141 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 KITLGP21583 273 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 TRA2AQ13595 282 aaKnown RBP eCLIP13.95□□□□□ -0.18
VARS2-212ENST00000542001 SLC23A3Q6PIS1 610 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 GALMQ96C23 342 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 MALSU1Q96EH3 234 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 TMEM100Q9NV29 134 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 A0A1W2PPE3 182 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 PPP1R2P9O14990 202 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 PSG2P11465 335 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 STARD6P59095 220 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 TAS2R30P59541 319 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 ZNF429Q86V71 674 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 GNPNAT1Q96EK6 184 aaPredicted RBP13.95□□□□□ -0.18
VARS2-212ENST00000542001 RNF212BA8MTL3 300 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 EWSR1Q01844 656 aaKnown RBP eCLIP13.95□□□□□ -0.18
VARS2-212ENST00000542001 MRPL41Q8IXM3 137 aaKnown RBP13.95□□□□□ -0.18
VARS2-212ENST00000542001 OR10P1Q8NGE3 313 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 CABLES2Q9BTV7 478 aa13.95□□□□□ -0.18
VARS2-212ENST00000542001 PATZ1Q9HBE1 687 aaKnown RBP13.95□□□□□ -0.18
VARS2-212ENST00000542001 PLXNB3Q9ULL4 1909 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 MFNGO00587 321 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 FCGR3BO75015 233 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 CTRB1P17538 263 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 GNG10P50151 68 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 FOXG1P55316 489 aaPredicted RBP13.94□□□□□ -0.18
VARS2-212ENST00000542001 VAX1Q5SQQ9 334 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 CTRB2Q6GPI1 263 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 IL34Q6ZMJ4 242 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 MDP1Q86V88 176 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 PTX4Q96A99 478 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 KCNMB2Q9Y691 235 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 M0R1X1 148 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 CRYAAP02489 173 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 ATP6V0CP27449 155 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 PPP1CBP62140 327 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 SRSF3P84103 164 aaKnown RBP13.94□□□□□ -0.18
VARS2-212ENST00000542001 AESQ08117 197 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 RAB31Q13636 194 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 SIGLEC12Q96PQ1 595 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 TTTY12Q9BZ98 90 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 A0A0A6YYD4 124 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 ZNF98A6NK75 572 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 ACTL6AO96019 429 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 PSMB3P49720 205 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 ZNF610Q8N9Z0 462 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 ASB13Q8WXK3 278 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 PINX1Q96BK5 328 aaKnown RBP13.94□□□□□ -0.18
VARS2-212ENST00000542001 NRIP2Q9BQI9 281 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 NDRG3Q9UGV2 375 aa13.94□□□□□ -0.18
VARS2-212ENST00000542001 H0YIZ8 118 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 CD74P04233 296 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 SLC25A4P12235 298 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 PPP1CCP36873 323 aaKnown RBP13.93□□□□□ -0.18
VARS2-212ENST00000542001 RBM11P57052 281 aaKnown RBP13.93□□□□□ -0.18
VARS2-212ENST00000542001 RBMS3Q6XE24 437 aaKnown RBP13.93□□□□□ -0.18
VARS2-212ENST00000542001 OVCH2Q7RTZ1 564 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 LDLRAD3Q86YD5 345 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 WDR54Q9H977 334 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 CDH23Q9H251 3354 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 LRP5LA4QPB2 252 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 H7BYZ3 331 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 NKX2-8O15522 239 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 SPINK4O60575 86 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 IGLV3-19P01714 112 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 FBP1P09467 338 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms