RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 KCNIP3Q9Y2W7 256 aa14.71□□□□□ -0.06
SPIDR-227ENST00000541342 DMXL2Q8TDJ6 3036 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 IGHV2-5P01817 119 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 SMIM6P0DI80 62 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 PPP1CCP36873 323 aaKnown RBP14.7□□□□□ -0.06
SPIDR-227ENST00000541342 ASCL1P50553 236 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 ASCL4Q6XD76 172 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 NAXEQ8NCW5 288 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 ARG1P05089 322 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 PMELP40967 661 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 CAMLGP49069 296 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 ZNF92Q03936 586 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 ABCA11PQ4W5N1 156 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 GPR157Q5UAW9 335 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 SLC22A25Q6T423 547 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 ZNF561Q8N587 486 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 HSD17B11Q8NBQ5 300 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 CCDC54Q8NEL0 328 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 CUL9Q8IWT3 2517 aa14.7□□□□□ -0.06
SPIDR-227ENST00000541342 UMAD1C9J7I0 102 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 M0R036 132 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 RAB5AP20339 215 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 KRBOX4Q5JUW0 171 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 C11orf1Q9H5F2 150 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 FABP9Q0Z7S8 132 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 PDCD1Q15116 288 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 OR4D5Q8NGN0 318 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 TP53RKQ96S44 253 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 SUCNR1Q9BXA5 334 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 C1QTNF5Q9BXJ0 243 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 FBXO7Q9Y3I1 522 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 A0A1W2PPE2 198 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 IL18BPO95998 194 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 OR8U8P0C7N1 319 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 CCL2P13500 99 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 SULT1A1P50225 295 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 FAM24BQ8N5W8 94 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 RSRP1Q9BUV0 290 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 GSN-AS1Q9NRJ2 163 aa14.69□□□□□ -0.06
SPIDR-227ENST00000541342 METTL1Q9UBP6 276 aaKnown RBP14.69□□□□□ -0.06
SPIDR-227ENST00000541342 BORCS7-ASMTA0A0B4J1R7 106 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 A0A1B0GV50 99 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 hCG_38984A0A1B0GV85 526 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 K7N7A8 449 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 SLC35G3Q8N808 338 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 MOB3AQ96BX8 217 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 CLCF1Q9UBD9 225 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 ATMQ13315 3056 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 DUSP1P28562 367 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 FBXW12Q6X9E4 464 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 COLCA1Q6ZS62 124 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 FBXL14Q8N1E6 418 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 YPEL4Q96NS1 127 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 TAAR6Q96RI8 345 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 RARRES2Q99969 163 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 PTPRZ1P23471 2315 aaPredicted RBP14.68□□□□□ -0.06
SPIDR-227ENST00000541342 S100A8P05109 93 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 GLP1RP43220 463 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 IL13RA2Q14627 380 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 TMEM42Q69YG0 159 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 BOD1Q96IK1 185 aa14.68□□□□□ -0.06
SPIDR-227ENST00000541342 KLK10O43240 276 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 HIKESHIQ53FT3 197 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 FBXW9Q5XUX1 488 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 TMEM182Q6ZP80 229 aaPredicted RBP14.67□□□□□ -0.06
SPIDR-227ENST00000541342 SLC35B3Q9H1N7 401 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 DSPP15924 2871 aaKnown RBP14.67□□□□□ -0.06
SPIDR-227ENST00000541342 S100A6P06703 90 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 RBP2P50120 134 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 CCL20P78556 96 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 ZNF251Q9BRH9 671 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 ABHD14AQ9BUJ0 271 aa14.67□□□□□ -0.06
SPIDR-227ENST00000541342 ST8SIA3O43173 380 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 PHF1O43189 567 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-227ENST00000541342 PRH1P02810 166 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 FABP1P07148 127 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 OR13C7P0DN81 318 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 CCNOP22674 350 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 AADACP22760 399 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 RAB1AP62820 205 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 C5orf24Q7Z6I8 188 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 SPSB4Q96A44 273 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 GMPPAQ96IJ6 420 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-227ENST00000541342 GP6Q9HCN6 339 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 C5orf49A4QMS7 147 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 AQP7O14520 342 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 SS18L1O75177 396 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-227ENST00000541342 EWSR1Q01844 656 aaKnown RBP eCLIP14.66□□□□□ -0.06
SPIDR-227ENST00000541342 OR8B8Q15620 311 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 P4HA3Q7Z4N8 544 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 GCNT2Q8N0V5 402 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 OR1K1Q8NGR3 316 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 TRIB1Q96RU8 372 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 ZNF391Q9UJN7 358 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 STRAPQ9Y3F4 350 aaKnown RBP14.66□□□□□ -0.06
SPIDR-227ENST00000541342 ZNF14P17017 642 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-227ENST00000541342 SPINK2P20155 84 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 RAB5CP51148 216 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 OR2B8PP59922 312 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 RHEBQ15382 184 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms