RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 OR5M8Q8NGP6 311 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 NEK7Q8TDX7 302 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 ZNF2Q9BSG1 426 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-204ENST00000540846 DPCDQ9BVM2 203 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-204ENST00000540846 FXYD6Q9H0Q3 95 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 MSL2Q9HCI7 577 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 Q9N2K0 584 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 DUSP13Q9UII6 198 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 A0A0B4J2A0 478 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 POM121CA8CG34 1229 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 HS3ST1O14792 307 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 RGS11O94810 467 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 NXPH2O95156 264 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 PTBP3O95758 552 aaKnown RBP10.5□□□□□ -0.73
SMAD3-204ENST00000540846 CTSDP07339 412 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-204ENST00000540846 RPS2P15880 293 aaKnown RBP10.5□□□□□ -0.73
SMAD3-204ENST00000540846 SERPINF1P36955 418 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 MDH2P40926 338 aaKnown RBP10.5□□□□□ -0.73
SMAD3-204ENST00000540846 BAMBIQ13145 260 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 SWI5Q1ZZU3 235 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 SHEQ5VZ18 495 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 SP5Q6BEB4 398 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-204ENST00000540846 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 FIP1L1Q6UN15 594 aaKnown RBP10.5□□□□□ -0.73
SMAD3-204ENST00000540846 ZNF295-AS1Q8N0V1 137 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 UXS1Q8NBZ7 420 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 MRPL30Q8TCC3 161 aaKnown RBP10.5□□□□□ -0.73
SMAD3-204ENST00000540846 PHB2Q99623 299 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 TMEM246Q9BRR3 403 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 WDR13Q9H1Z4 485 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 LIME1Q9H400 295 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 TREM2Q9NZC2 230 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 SHPKQ9UHJ6 478 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 TANC2Q9HCD6 1990 aa10.5□□□□□ -0.73
SMAD3-204ENST00000540846 KIR2DS1A0A191URI9 304 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 C3orf80F5H4A9 247 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 HSPB6O14558 160 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 DEGS1O15121 323 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 SIX6O95475 246 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 SFT2D2O95562 160 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 DANCRP0C864 163 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 PGAM2P15259 253 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 ZNF44P15621 663 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 PI3P19957 117 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 COL8A1P27658 744 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 CD200P41217 278 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 GLP1RP43220 463 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 KIR2DS4P43632 304 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 SUPT4H1P63272 117 aaKnown RBP10.49□□□□□ -0.73
SMAD3-204ENST00000540846 KIR2DS1Q14954 304 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 PRAMEF6Q5VXH4 476 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 C11orf71Q6IPW1 123 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 ZNF880Q6PDB4 577 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 WDR82Q6UXN9 313 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 ASCC1Q8N9N2 400 aaKnown RBP10.49□□□□□ -0.73
SMAD3-204ENST00000540846 WDR89Q96FK6 387 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-204ENST00000540846 GON7Q9BXV9 100 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 TMPRSS13Q9BYE2 586 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 SLA2Q9H6Q3 261 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 TAAR3PQ9P1P4 343 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 SLC23A1Q9UHI7 598 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 C14orf166Q9Y224 244 aaKnown RBP10.49□□□□□ -0.73
SMAD3-204ENST00000540846 HSPB11Q9Y547 144 aa10.49□□□□□ -0.73
SMAD3-204ENST00000540846 DSCAMO60469 2012 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 IGHV3-64DA0A0J9YX35 117 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 DBX1A6NMT0 343 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 SLC33A1O00400 549 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-204ENST00000540846 OR2H2O95918 312 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 CD8AP01732 235 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 ADH4P08319 380 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 MOB1BQ7L9L4 216 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 DTX2Q86UW9 622 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 GAPTQ8N292 157 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 GRPEL2Q8TAA5 225 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 CASTOR1Q8WTX7 329 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 IGFBPL1Q8WX77 278 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 RDH5Q92781 318 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 MOB3AQ96BX8 217 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 A6NLC8 198 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 TRDCB7Z8K6 153 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 B9A039 149 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 H7C1Q1 480 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 SH2D1BO14796 132 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 SOD3P08294 240 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 ZNF728P0DKX0 622 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 COX6B1P14854 86 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 GLRA1P23415 457 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 FCGR2CP31995 323 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 UCP3P55916 312 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 TLE4Q04727 773 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 PAN3Q58A45 887 aaKnown RBP10.48□□□□□ -0.73
SMAD3-204ENST00000540846 LIN54Q6MZP7 749 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 ZNF826PQ6ZT77 177 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 MUC15Q8N387 334 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 OR2Z1Q8NG97 314 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 CLEC4MQ9H2X3 399 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-204ENST00000540846 PLEKHF2Q9H8W4 249 aa10.48□□□□□ -0.73
SMAD3-204ENST00000540846 AKAP6Q13023 2319 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 PLSCR5A0PG75 271 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms