RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 HRASLSQ9HDD0 168 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 NECAP2Q9NVZ3 263 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-207ENST00000539047 ANXA10Q9UJ72 324 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 SCP2D1Q9UJQ7 156 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 PCDHB10Q9UN67 800 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 TMEM82A0PJX8 343 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 LYNX1G3V0Z9 82 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 PLA2G10O15496 165 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF737O75373 536 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 IGHV2-70P01814 119 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 CD74P04233 296 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 CTXN2P0C2S0 81 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 LYNX1P0DP58 116 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 HRH1P35367 487 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 GPR6P46095 362 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-207ENST00000539047 PDLIM4P50479 330 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 EDDM3BP56851 147 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 TSPAN5P62079 268 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 HLA-DRB3P79483 266 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 PAX5Q02548 391 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 CDK10Q15131 360 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF787Q6DD87 383 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 PLET1Q6UQ28 207 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 C17orf107Q6ZR85 190 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 Q6ZS49 121 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 ARRDC1Q8N5I2 433 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 ZNRF1Q8ND25 227 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 PLPPR1Q8TBJ4 325 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 CHPT1Q8WUD6 406 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 MAFIPQ8WZ33 124 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 SNAPC3Q92966 411 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 Q9N2K0 584 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 EHFQ9NZC4 300 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 SLC25A10Q9UBX3 287 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-207ENST00000539047 LPAR3Q9UBY5 353 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
VAMP1-207ENST00000539047 TRDCB7Z8K6 153 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 M0QYG6 137 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 PMP2P02689 132 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 TFF1P04155 84 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 RPS2P15880 293 aaKnown RBP12.86□□□□□ -0.35
VAMP1-207ENST00000539047 NDUFB7P17568 137 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 COL8A1P27658 744 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 P2RX3P56373 397 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 AESQ08117 197 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 TMEM155Q4W5P6 130 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 VAX1Q5SQQ9 334 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 AVPI1Q5T686 147 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 RSBN1Q5VWQ0 802 aaPredicted RBP12.86□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF295-AS1Q8N0V1 137 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 FAM216BQ8N7L0 139 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 OR8B3Q8NGG8 313 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 OR8B2Q96RD0 313 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 TMEM246Q9BRR3 403 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 OR6C3Q9NZP0 311 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 KAAG1Q9UBP8 84 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 MIOXQ9UGB7 285 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 KIF25Q9UIL4 384 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 MYO9AB2RTY4 2548 aa12.86□□□□□ -0.35
VAMP1-207ENST00000539047 FABP7O15540 132 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 LY6HO94772 140 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 ERP29P30040 261 aaKnown RBP12.85□□□□□ -0.35
VAMP1-207ENST00000539047 ATP5J2P56134 94 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 RBMS2Q15434 407 aaKnown RBP12.85□□□□□ -0.35
VAMP1-207ENST00000539047 SCGB2B2Q4G0G5 96 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 NRARPQ7Z6K4 114 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF554Q86TJ5 538 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 GAPTQ8N292 157 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 OR4A4PQ8NGN8 299 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 CCDC107Q8WV48 283 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 TINAGL1Q9GZM7 467 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-207ENST00000539047 NCOR1P1Q9H4R4 102 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 MAB21L2Q9Y586 359 aa12.85□□□□□ -0.35
VAMP1-207ENST00000539047 TRGV10A0A0A0MS01 117 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 ODAMA1E959 279 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 SPINT2O43291 252 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 SSX4O60224 188 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 GIFP27352 417 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 SLC6A1P30531 599 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 RBMXP38159 391 aaKnown RBP12.84□□□□□ -0.35
VAMP1-207ENST00000539047 ECI1P42126 302 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 OXA1LQ15070 435 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 FAAP20Q6NZ36 180 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF880Q6PDB4 577 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 CLEC2AQ6UVW9 174 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF565Q8N9K5 539 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 OR56B4Q8NH76 319 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 IGFBPL1Q8WX77 278 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 H1FXQ92522 213 aaKnown RBP12.84□□□□□ -0.35
VAMP1-207ENST00000539047 NEIL1Q96FI4 390 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-207ENST00000539047 COQ2Q96H96 371 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 GINS4Q9BRT9 223 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 PIMREGQ9BSJ6 248 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 SHARPINQ9H0F6 387 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 NUBP2Q9Y5Y2 271 aa12.84□□□□□ -0.35
VAMP1-207ENST00000539047 hADV38S2A0JD32 116 aa12.83□□□□□ -0.36
VAMP1-207ENST00000539047 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.36
VAMP1-207ENST00000539047 NDUFS8O00217 210 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms