RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 MELTFP08582 738 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 OPN1MW2P0DN77 364 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 OPN1MW3P0DN78 364 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 BLVRBP30043 206 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 EFNB2P52799 333 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 RPL15P61313 204 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 MRPS15P82914 257 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 QRFPP83859 136 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 C2orf68Q2NKX9 166 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 TMEM155Q4W5P6 130 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 NHLRC3Q5JS37 347 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 SPANXN2Q5MJ10 180 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 TMEM69Q5SWH9 247 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 RAB12Q6IQ22 244 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 LAX1Q8IWV1 398 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 CMTM4Q8IZR5 234 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 MUC20Q8N307 709 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 PPP1R35Q8TAP8 253 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 ZDHHC16Q969W1 377 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 SEH1LQ96EE3 360 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 NICN1Q9BSH3 213 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 TM2D1Q9BX74 207 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 ABCG5Q9H222 651 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 SPACA1Q9HBV2 294 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 HES4Q9HCC6 221 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 PLEKHJ1Q9NW61 149 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 EXTL2Q9UBQ6 330 aa10.26□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A10PA6NDY2 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A18PA6NE21 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A16PA6NEW6 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A20PA6NIJ5 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A8PA6NJQ4 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A7PA6NKC0 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A22PA8MWA6 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A12PA8MX19 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A5PA8MXJ8 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A23PA8MXZ1 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 CSF1P09603 554 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A15PP0C7V4 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A13PP0C7W8 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A14PP0C7W9 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM90A24PP0C7X0 464 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 PSG2P11465 335 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 ELK1P19419 428 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 MDH2P40926 338 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 MNDAP41218 407 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 CEBPDP49716 269 aaPredicted RBP10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 HOXA4Q00056 320 aaPredicted RBP10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 PLA2G7Q13093 441 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 MADCAM1Q13477 382 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 IL18Q14116 193 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 ARL6IP1Q15041 203 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 ZNF146Q15072 292 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 ZMYND11Q15326 602 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 PAN3Q58A45 887 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 TEX36Q5VZQ5 186 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 RUSC1-AS1Q66K80 236 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 CNIH2Q6PI25 160 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 METAP1DQ6UB28 335 aaPredicted RBP10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 Q6ZTK2 550 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 SLC36A1Q7Z2H8 476 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 SPICQ8N5J4 248 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 DTX3Q8N9I9 347 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 ASCC1Q8N9N2 400 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 Q8NFD4 153 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 OR6Q1Q8NGQ2 317 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 OR10R2Q8NGX6 335 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 SLC25A38Q96DW6 304 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 RAB3CQ96E17 227 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 IL36RNQ9UBH0 155 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 MRPS7Q9Y2R9 242 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 POMT1Q9Y6A1 747 aa10.25□□□□□ -0.77
CLSTN3-208ENST00000538933 TENM2Q9NT68 2774 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 TRAV18A0A075B6X5 111 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 A0A0A6YYH2 397 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 FABP12A6NFH5 140 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 A6NJ64 397 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 MCRIP1C9JLW8 97 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 HSPB6O14558 160 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 SOCS1O15524 211 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 ADAM20O43506 726 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 NDUFA2O43678 99 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 OR2H2O95918 312 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 WNT2P09544 360 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 FUT3P21217 361 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 CDK2P24941 298 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 PRDX2P32119 198 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 TNFSF8P32971 234 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 COL10A1Q03692 680 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 RBM39Q14498 530 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM131AQ6UXB0 335 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 BAIAP2L2Q6UXY1 529 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 IZUMO1Q8IYV9 350 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 TMEM185AQ8NFB2 350 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 OR4M1Q8NGD0 313 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 DYRK2Q92630 601 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 WDFY2Q96P53 400 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
CLSTN3-208ENST00000538933 IGHV2-70DA0A0C4DH43 119 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms