RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 DGCR2P98153 550 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 LSAMPQ13449 338 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 IGSF11Q5DX21 431 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 OR5P3Q8WZ94 311 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 YIPF5Q969M3 257 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 ZNF2Q9BSG1 426 aaPredicted RBP6.07□□□□□ -1.44
MSH6-209ENST00000538136 NECAP2Q9NVZ3 263 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 MAB21L2Q9Y586 359 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 CELSR1Q9NYQ6 3014 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 EIF4EP06730 217 aaKnown RBP6.07□□□□□ -1.44
MSH6-209ENST00000538136 SCTP09683 121 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 BCAP31P51572 246 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 TESK1Q15569 626 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 TRAM1Q15629 374 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 TMEM249Q2WGJ8 235 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 CNPY1Q3B7I2 92 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 CCDC58Q4VC31 144 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 THOC7Q6I9Y2 204 aaKnown RBP6.07□□□□□ -1.44
MSH6-209ENST00000538136 ABHD12Q8N2K0 398 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 ZNF714Q96N38 554 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 PSMG3-AS1Q96PY0 264 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 OR2D2Q9H210 308 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 C19orf12Q9NSK7 152 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 CSMD2Q7Z408 3487 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 TMEM272A0A1B0GTI8 110 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 RPL36A-HNRNPH2H7BZ11 118 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 PSPNO60542 156 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 CRYZL1O95825 349 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 PRB4P10163 310 aaPredicted RBP6.06□□□□□ -1.44
MSH6-209ENST00000538136 PAX7P23759 505 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 DCTDP32321 178 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 HRH1P35367 487 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 NR4A2P43354 598 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 CCR6P51684 374 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 TPBGQ13641 420 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 VKORC1L1Q8N0U8 176 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 POM121Q96HA1 1249 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 SULT4A1Q9BR01 284 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 EXOGQ9Y2C4 368 aaKnown RBP6.06□□□□□ -1.44
MSH6-209ENST00000538136 TRDV1A0A1B0GX56 115 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 H3BP45 60 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 PLPP2O43688 288 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 CSF3P09919 207 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 OR5H8P0DN80 308 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 FAUP35544 74 aaKnown RBP6.06□□□□□ -1.44
MSH6-209ENST00000538136 RHOUQ7L0Q8 258 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 CMTM1Q8IZ96 169 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 ZNF418Q8TF45 676 aaPredicted RBP6.06□□□□□ -1.44
MSH6-209ENST00000538136 THRSPQ92748 146 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 EAF1Q96JC9 268 aaPredicted RBP6.06□□□□□ -1.44
MSH6-209ENST00000538136 HEXA-AS1Q9H8Q6 139 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 RAB22AQ9UL26 194 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 KLF2Q9Y5W3 355 aaPredicted RBP6.06□□□□□ -1.44
MSH6-209ENST00000538136 SHISA3A0PJX4 238 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 ODAMA1E959 279 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 SLC17A2O00624 439 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 F12P00748 615 aaPredicted RBP6.06□□□□□ -1.44
MSH6-209ENST00000538136 CD3DP04234 171 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 GSTT2P0CG29 244 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 GSTT2BP0CG30 244 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 GABRB1P18505 474 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 ARHGDIBP52566 201 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 GABARAPL2P60520 117 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 DEFA5Q01523 94 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 ROM1Q03395 351 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 IZUMO4Q1ZYL8 232 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 NKAIN3Q8N8D7 197 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 SEC22AQ96IW7 307 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 S1PR3Q99500 378 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 OPA3Q9H6K4 179 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 ZNF696Q9H7X3 374 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 ENY2Q9NPA8 101 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 C12orf4Q9NQ89 552 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 AK3Q9UIJ7 227 aa6.06□□□□□ -1.44
MSH6-209ENST00000538136 SF3B6Q9Y3B4 125 aaKnown RBP6.06□□□□□ -1.44
MSH6-209ENST00000538136 IGKV1-27A0A075B6S5 117 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 IGKV1-12A0A0C4DH73 117 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 A0A0U1RQK1 487 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 ZNF320A2RRD8 509 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 RNF212BA8MTL3 300 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 B4DSR2 109 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 FABP7O15540 132 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 PDCD6O75340 191 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 IGKV1D-12P01611 117 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 CHRM2P08172 466 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 GIFP27352 417 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 CD40LGP29965 261 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 MRPS11P82912 194 aaKnown RBP6.05□□□□□ -1.44
MSH6-209ENST00000538136 ZNF273Q14593 569 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 MUC20Q8N307 709 aaPredicted RBP6.05□□□□□ -1.44
MSH6-209ENST00000538136 OR13A1Q8NGR1 328 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 TMEM186Q96B77 213 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 DMRTB1Q96MA1 342 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 PNRC2Q9NPJ4 139 aaKnown RBP6.05□□□□□ -1.44
MSH6-209ENST00000538136 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 IGHV3OR16-13A0A075B7E8 117 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 IGHV3-74A0A0B4J1X5 117 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 TMEM178BH3BS89 294 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 LIPFP07098 398 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 NSUN5P1Q3KNT7 163 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms