RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 RUNX1Q01196 453 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 HPSE2Q8WWQ2 592 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 NTNG2Q96CW9 530 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 GALNT14Q96FL9 552 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 GINS3Q9BRX5 216 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 SLC7A10Q9NS82 523 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 POMT1Q9Y6A1 747 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 SEC14L6B5MCN3 397 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 PPYP01298 95 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 RAC1P63000 192 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF611Q8N823 705 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 SLC7A11Q9UPY5 501 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 OR5H1A6NKK0 313 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 JMJD7P0C870 316 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 DTYMKP23919 212 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 WIPI1Q5MNZ9 446 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-226ENST00000533820 AKR1C8PQ5T2L2 129 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 ANGPTL4Q9BY76 406 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 TMEM38BQ9NVV0 291 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 HSF4Q9ULV5 492 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 ESPL1Q14674 2120 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 C3orf85A0A1B0GTC6 90 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 IGSF23A1L1A6 192 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 CFIP05156 583 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 COX6A1P12074 109 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 SOHLH1Q5JUK2 328 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 OR2C3Q8N628 320 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 ABHD3Q8WU67 409 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF845Q96IR2 970 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-226ENST00000533820 SLC35B3Q9H1N7 401 aa16.66■□□□□ 0.26
CAPN1-226ENST00000533820 A0A096LPE4 126 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 A0A1W2PPZ6 126 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 H3BP45 60 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 HSD17B6O14756 317 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 PDCD6O75340 191 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 ATP6V0CP27449 155 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 CXCL12P48061 93 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 SUCLG1P53597 346 aaKnown RBP16.65■□□□□ 0.26
CAPN1-226ENST00000533820 LHFPL2Q6ZUX7 228 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF695Q8IW36 515 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 SUMF2Q8NBJ7 301 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 RAB24Q969Q5 203 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 MOB3AQ96BX8 217 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 FOXB1Q99853 325 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 MPPED1O15442 326 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 HIST3H2BBQ8N257 126 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 SPEM1Q8N4L4 309 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 ARV1Q9H2C2 271 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 CBLN4Q9NTU7 201 aa16.65■□□□□ 0.26
CAPN1-226ENST00000533820 A0A087WZY1 265 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 MKRN2OSH3BPM6 223 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 ADAM20O43506 726 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 OR2C1O95371 312 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 SCTP09683 121 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 NKX2-1P43699 371 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-226ENST00000533820 HLA-BQ31612 363 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 C4orf17Q53FE4 359 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 GPR157Q5UAW9 335 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 FAM180AQ6UWF9 173 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 FOXL2NBQ6ZUU3 175 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 TBC1D26Q86UD7 250 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 TMEM171Q8WVE6 324 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 BOD1Q96IK1 185 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 PACRGQ96M98 296 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-226ENST00000533820 CRIM1Q9NZV1 1036 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 ZNF724A8MTY0 619 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 EPHA1P21709 976 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 FKBP2P26885 142 aaKnown RBP16.64■□□□□ 0.25
CAPN1-226ENST00000533820 MRPS11P82912 194 aaKnown RBP16.64■□□□□ 0.25
CAPN1-226ENST00000533820 SRYQ05066 204 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 IZUMO4Q1ZYL8 232 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 IMMP1LQ96LU5 166 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 KIAA2026Q5HYC2 2103 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 KLF7O75840 302 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-226ENST00000533820 GNRHRP30968 328 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 HMGN3Q15651 99 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 OR5C1Q8NGR4 320 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 C10orf35Q96D05 121 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 PBDC1Q9BVG4 233 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 R4GN57 208 aa16.64■□□□□ 0.25
CAPN1-226ENST00000533820 RBM11P57052 281 aaKnown RBP16.63■□□□□ 0.25
CAPN1-226ENST00000533820 IL13RA2Q14627 380 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 IFI44Q8TCB0 444 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 EXTL1Q92935 676 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 OR2H1Q9GZK4 316 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 UBE2ZQ9H832 354 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-226ENST00000533820 LIPGQ9Y5X9 500 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BKO60814 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BJP06899 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 FUT3P21217 361 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BOP23527 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 OTX2P32243 289 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BBP33778 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BDP58876 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BCP62807 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 NKX6-1P78426 367 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST2H2BEQ16778 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-226ENST00000533820 ZNF343Q6P1L6 599 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 GAPTQ8N292 157 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms