RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 NQO2P16083 231 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 ERVFRD-1P60508 538 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 SPCS3P61009 180 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 ZNF528Q3MIS6 628 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 BLNKQ8WV28 456 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 WSB1Q9Y6I7 421 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 CABIN1Q9Y6J0 2220 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 A0A0J9YW62 118 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 ORM1P02763 201 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 UBE2L3P68036 154 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 RAB32Q13637 225 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 HARBI1Q96MB7 349 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 CHST5Q9GZS9 411 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 SLIRPQ9GZT3 109 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 TECRQ9NZ01 308 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 APELAP0DMC3 54 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 PRSS54Q6PEW0 395 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 PDPNQ86YL7 162 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 SHISA5Q8N114 240 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 NAGKQ9UJ70 344 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 RPS4Y1P22090 263 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 RPL31P62899 125 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 GUK1Q16774 197 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 KLHDC1Q8N7A1 406 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 GPA33Q99795 319 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 ANGPTL4Q9BY76 406 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 GATCO43716 136 aaKnown RBP12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 ACP1P24666 158 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 UQCC3Q6UW78 93 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 ZNF429Q86V71 674 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 SLC25A42Q86VD7 318 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 OR10G4Q8NGN3 311 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 OR10G9Q8NGN4 311 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 OR10G7Q8NGN6 311 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 SLC25A10Q9UBX3 287 aaPredicted RBP12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 LOC101059948A0A1B0GTJ6 334 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 OR2T8A6NH00 312 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 HLA-DRB3P79483 266 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 FAM27BQ5VT28 67 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 FAM24AA6NFZ4 105 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 CPN1P15169 458 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 DOK5Q9P104 306 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 ICE1Q9Y2F5 2266 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 ZP4Q12836 540 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 PIGYQ3MUY2 71 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 MIDNQ504T8 468 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 TSPO2Q5TGU0 170 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 TBC1D26Q86UD7 250 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 C11orf42Q8N5U0 333 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 HLA-GP17693 338 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 MMDQ15546 238 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 OR1B1Q8NGR6 318 aa12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 ZNF107Q9UII5 783 aaPredicted RBP12.91□□□□□ -0.34
PCDHA9-202ENST00000532602 SCN2AQ99250 2005 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 SOCS1O15524 211 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 GSTZ1O43708 216 aaPredicted RBP12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 INHBBP09529 407 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 PTTG1IPP53801 180 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 SLC26A10Q8NG04 563 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 PRSS50Q9UI38 385 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 MMP24Q9Y5R2 645 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 RPL30P62888 115 aaKnown RBP12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 CLEC12BQ2HXU8 276 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 ZNF658BQ4V348 819 aaPredicted RBP12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 OR4A4PQ8NGN8 299 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 WNT2BQ93097 391 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 PCGF1Q9BSM1 259 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 RNF122Q9H9V4 155 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 IL17BQ9UHF5 180 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 ANKRD20A5PA0PJZ0 165 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 TCAPO15273 167 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 TXNDC12O95881 172 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 OR8I2Q8N0Y5 310 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 LILRB1Q8NHL6 650 aaPredicted RBP12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 RPS4Y2Q8TD47 263 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 DTD1Q8TEA8 209 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 MVDP53602 400 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 Q1RN00 199 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 TMEM241Q24JQ0 296 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 PDZD11Q5EBL8 140 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 FAM219AQ8IW50 185 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 OR4D10Q8NGI6 311 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 OR1L8Q8NGR8 309 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 OR2J1Q9GZK6 312 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 MPC2O95563 127 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 PPYP01298 95 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 TPPP2P59282 170 aa12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 SUMO1P63165 101 aaKnown RBP12.9□□□□□ -0.34
PCDHA9-202ENST00000532602 PERPQ96FX8 193 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 KLHDC2Q9Y2U9 406 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 WIPI2Q9Y4P8 454 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 PATJQ8NI35 1801 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 CTSSP25774 331 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 ZNF273Q14593 569 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms