RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 PAX8Q06710 450 aa13.95□□□□□ -0.18
SF3B2-211ENST00000531041 TCF23Q7RTU1 214 aa13.95□□□□□ -0.18
SF3B2-211ENST00000531041 RTN4RL2Q86UN3 420 aa13.95□□□□□ -0.18
SF3B2-211ENST00000531041 KIR3DL3Q8N743 410 aa13.95□□□□□ -0.18
SF3B2-211ENST00000531041 ING3Q9NXR8 418 aa13.95□□□□□ -0.18
SF3B2-211ENST00000531041 OR6C3Q9NZP0 311 aa13.95□□□□□ -0.18
SF3B2-211ENST00000531041 UBE2J1Q9Y385 318 aaPredicted RBP13.95□□□□□ -0.18
SF3B2-211ENST00000531041 MEIKINA0A087WXM9 373 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 TRGV10A0A0A0MS01 117 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 A0A1W2PPH5 198 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 SERPINE3A8MV23 424 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 J3QLI3 93 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 EIF4EP06730 217 aaKnown RBP13.94□□□□□ -0.18
SF3B2-211ENST00000531041 GNB3P16520 340 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 ZNF273Q14593 569 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 CR1LQ2VPA4 569 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 MCFD2Q8NI22 146 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 KCNS2Q9ULS6 477 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 KPTNQ9Y664 436 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 A3GALT2U3KPV4 340 aa13.94□□□□□ -0.18
SF3B2-211ENST00000531041 CTDSP2O14595 271 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 XRCC3O43542 346 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 NAPSAO96009 420 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 GSTP1P09211 210 aaKnown RBP13.93□□□□□ -0.18
SF3B2-211ENST00000531041 ELK1P19419 428 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 CDK2P24941 298 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 CDNFQ49AH0 187 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 OLFML2AQ68BL7 652 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 CLEC9AQ6UXN8 241 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 C1orf122Q6ZSJ8 110 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 ZNF565Q8N9K5 539 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 DYRK2Q92630 601 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 RIMS4Q9H426 269 aaPredicted RBP13.93□□□□□ -0.18
SF3B2-211ENST00000531041 ZMAT3Q9HA38 289 aaKnown RBP13.93□□□□□ -0.18
SF3B2-211ENST00000531041 TAS2R3Q9NYW6 316 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 AK3Q9UIJ7 227 aa13.93□□□□□ -0.18
SF3B2-211ENST00000531041 POM121CA8CG34 1229 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 M0R1W7 72 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 RGS5O15539 181 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 ZNF728P0DKX0 622 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 CGB3P0DN86 165 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 CGB7P0DN87 165 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 DLX6P56179 175 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 ARF6P62330 175 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 ZNF260Q3ZCT1 412 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 FAHD2BQ6P2I3 314 aaPredicted RBP13.92□□□□□ -0.18
SF3B2-211ENST00000531041 TRAPPC6BQ86SZ2 158 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 MRPL30Q8TCC3 161 aaKnown RBP13.92□□□□□ -0.18
SF3B2-211ENST00000531041 FAHD2AQ96GK7 314 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 ZNF714Q96N38 554 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 TMPRSS13Q9BYE2 586 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 SIRPDQ9H106 197 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 MIXL1Q9H2W2 232 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 MMP27Q9H306 513 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 C7orf69Q9H7B7 122 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 ONECUT1Q9UBC0 465 aa13.92□□□□□ -0.18
SF3B2-211ENST00000531041 TRAV18A0A075B6X5 111 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 TRBV6-6A0A0A6YYG2 114 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 MEX3AA1L020 520 aaKnown RBP13.91□□□□□ -0.18
SF3B2-211ENST00000531041 ZNF729A6NN14 1252 aaPredicted RBP13.91□□□□□ -0.18
SF3B2-211ENST00000531041 C17orf98A8MV24 154 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 A8MV72 311 aaPredicted RBP13.91□□□□□ -0.18
SF3B2-211ENST00000531041 RBP4P02753 201 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 MELTFP08582 738 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 MMP9P14780 707 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 CCL3L1P16619 93 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 GZMHP20718 246 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 METTL11BQ5VVY1 283 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 LAX1Q8IWV1 398 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 C11orf42Q8N5U0 333 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 Q8N7P7 452 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 OR13A1Q8NGR1 328 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 OR4K15Q8NH41 348 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 WDFY2Q96P53 400 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 CMSS1Q9BQ75 279 aaKnown RBP13.91□□□□□ -0.18
SF3B2-211ENST00000531041 C6orf62Q9GZU0 229 aaPredicted RBP13.91□□□□□ -0.18
SF3B2-211ENST00000531041 YAE1D1Q9NRH1 226 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 MBNL3Q9NUK0 354 aaKnown RBP13.91□□□□□ -0.18
SF3B2-211ENST00000531041 ADAM30Q9UKF2 790 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 TRAPPC2LQ9UL33 140 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 AUP1Q9Y679 476 aa13.91□□□□□ -0.18
SF3B2-211ENST00000531041 hCG_1809904A0A1W2PP81 198 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 A0A1W2PPE2 198 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 A0A1W2PR64 198 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 A0A1W2PRV1 198 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 FAM25AB3EWG3 89 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 FAM25CB3EWG5 89 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 FAM25GB3EWG6 89 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 CD3GP09693 182 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 GLP1RP43220 463 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 PNLIPRP3Q17RR3 467 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 TMEM69Q5SWH9 247 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 HACD4Q5VWC8 232 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 ZNF880Q6PDB4 577 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 CCDC107Q8WV48 283 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 GAL3ST2Q9H3Q3 398 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 GSX1Q9H4S2 264 aaPredicted RBP13.9□□□□□ -0.18
SF3B2-211ENST00000531041 LINC00574Q9H8X3 128 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 UNKLQ9H9P5 680 aaKnown RBP13.9□□□□□ -0.18
SF3B2-211ENST00000531041 C12orf4Q9NQ89 552 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 204.4 ms