RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 H3F3AP84243 136 aa10.83□□□□□ -0.68
BDNF-215ENST00000530861 FAM27E3Q08E93 113 aa10.83□□□□□ -0.68
BDNF-215ENST00000530861 ZNF154Q13106 437 aa10.83□□□□□ -0.68
BDNF-215ENST00000530861 OR2F1Q13607 317 aa10.83□□□□□ -0.68
BDNF-215ENST00000530861 PDZD11Q5EBL8 140 aa10.83□□□□□ -0.68
BDNF-215ENST00000530861 OR5C1Q8NGR4 320 aa10.83□□□□□ -0.68
BDNF-215ENST00000530861 DYNLRB1Q9NP97 96 aa10.83□□□□□ -0.68
BDNF-215ENST00000530861 CACNG5Q9UF02 275 aa10.83□□□□□ -0.68
BDNF-215ENST00000530861 C3orf85A0A1B0GTC6 90 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 IFNA10P01566 189 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 STX12Q86Y82 276 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 OR52L2PQ8NGH6 319 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 LRRC29Q8WV35 223 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 SPACA1Q9HBV2 294 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 AURKAIP1Q9NWT8 199 aaPredicted RBP10.82□□□□□ -0.68
BDNF-215ENST00000530861 SPRR3Q9UBC9 169 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 ATP6V1G2-DDX39BF2Z307 99 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 ZNF735P0CB33 412 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 FOXO1Q12778 655 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 HOGA1Q86XE5 327 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 ADAMTS17Q8TE56 1095 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 GLS2Q9UI32 602 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 PURGQ9UJV8 347 aaKnown RBP10.82□□□□□ -0.68
BDNF-215ENST00000530861 ATP23Q9Y6H3 246 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 FAM90A27PA6NNH2 459 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 C21orf140B9A014 251 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 H0YIZ8 118 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 ST8SIA5O15466 376 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 CHST1O43916 411 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 IGHMP01871 453 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 GP1BAP07359 652 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 PSG2P11465 335 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 CLDN18P56856 261 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 KIAA0141Q14154 515 aaPredicted RBP10.82□□□□□ -0.68
BDNF-215ENST00000530861 Q3ZCU0 254 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 MOGAT3Q86VF5 341 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 FAM185AQ8N0U4 392 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 VKORC1L1Q8N0U8 176 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 RXFP4Q8TDU9 374 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 BSCL2Q96G97 398 aaPredicted RBP10.82□□□□□ -0.68
BDNF-215ENST00000530861 GNG13Q9P2W3 67 aa10.82□□□□□ -0.68
BDNF-215ENST00000530861 CD1AP06126 327 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 MELTFP08582 738 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 RBM11P57052 281 aaKnown RBP10.81□□□□□ -0.68
BDNF-215ENST00000530861 MIDNQ504T8 468 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 ZDHHC22Q8N966 263 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 ERGIC1Q969X5 290 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 OR2D2Q9H210 308 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 SH3BGRL3Q9H299 93 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 PARD6AQ9NPB6 346 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 SH2D1BO14796 132 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 CYTIPO60759 359 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 MPGP29372 298 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 REG1BP48304 166 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 GUCA2BQ16661 112 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 JMJD6Q6NYC1 403 aaPredicted RBP10.81□□□□□ -0.68
BDNF-215ENST00000530861 GFRALQ6UXV0 394 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 ETV3LQ6ZN32 361 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 TP53RKQ96S44 253 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 CLCC1Q96S66 551 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 PLXNB1O43157 2135 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 EPG5Q9HCE0 2579 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 A0A0U1RQV5 110 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 IFI6P09912 130 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 IRF2P14316 349 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 MECP2P51608 486 aaKnown RBP10.81□□□□□ -0.68
BDNF-215ENST00000530861 EIF3IQ13347 325 aaKnown RBP10.81□□□□□ -0.68
BDNF-215ENST00000530861 ZNF718Q3SXZ3 478 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 ZNRF1Q8ND25 227 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 TMEM54Q969K7 222 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 MED30Q96HR3 178 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 NAA60Q9H7X0 242 aa10.81□□□□□ -0.68
BDNF-215ENST00000530861 SCAF4O95104 1147 aaKnown RBP10.8□□□□□ -0.68
BDNF-215ENST00000530861 ARG1P05089 322 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 FAM87AP0C7U9 286 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 NAT2P11245 290 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 SRSF3P84103 164 aaKnown RBP10.8□□□□□ -0.68
BDNF-215ENST00000530861 RNPS1Q15287 305 aaKnown RBP10.8□□□□□ -0.68
BDNF-215ENST00000530861 CSRP2Q16527 193 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 PNLIPRP3Q17RR3 467 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 OVCH2Q7RTZ1 564 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 NECAP1Q8NC96 275 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 ZC3H10Q96K80 434 aaKnown RBP10.8□□□□□ -0.68
BDNF-215ENST00000530861 Q96M66 194 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 RTBDNQ9BSG5 229 aaPredicted RBP10.8□□□□□ -0.68
BDNF-215ENST00000530861 CNTNAP3Q9BZ76 1288 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 USP9XQ93008 2570 aaPredicted RBP10.8□□□□□ -0.68
BDNF-215ENST00000530861 TNCP24821 2201 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 MED12LQ86YW9 2145 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 TPPPO94811 219 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 IGHV3-48P01763 117 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 ZNF14P17017 642 aaPredicted RBP10.8□□□□□ -0.68
BDNF-215ENST00000530861 MPV17P39210 176 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 ZNF709Q8N972 641 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 OR1L1Q8NH94 360 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 TRAF4Q9BUZ4 470 aaPredicted RBP10.8□□□□□ -0.68
BDNF-215ENST00000530861 RHOFQ9HBH0 211 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 B3GALT5-AS1P59052 145 aa10.8□□□□□ -0.68
BDNF-215ENST00000530861 ERVFRD-1P60508 538 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms