RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ATAD3CQ5T2N8 411 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 DUX4L9Q6RFH8 374 aaPredicted RBP14.26□□□□□ -0.13
CCS-204ENST00000526066 ZNF841Q6ZN19 808 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 C1orf229Q6ZS94 237 aaPredicted RBP14.26□□□□□ -0.13
CCS-204ENST00000526066 OR8H2Q8N162 312 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 TMEM185AQ8NFB2 350 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 RAB3CQ96E17 227 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 WDFY2Q96P53 400 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 TMPRSS13Q9BYE2 586 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 C7orf69Q9H7B7 122 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCS-204ENST00000526066 DUX4Q9UBX2 424 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 MCRIP1C9JLW8 97 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 DVL1O14640 695 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 MGST3O14880 152 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 XRCC3O43542 346 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 CLPXO76031 633 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 AVPP01185 164 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 SELLP14151 372 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 CDK2P24941 298 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 PLAC9Q5JTB6 97 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 METAP1DQ6UB28 335 aaPredicted RBP14.25□□□□□ -0.13
CCS-204ENST00000526066 Q6ZTK2 550 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 LAX1Q8IWV1 398 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 OR4S1Q8NGB4 309 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 PPA2Q9H2U2 334 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 PLEKHJ1Q9NW61 149 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 SLC25A10Q9UBX3 287 aaPredicted RBP14.25□□□□□ -0.13
CCS-204ENST00000526066 CLN8Q9UBY8 286 aa14.25□□□□□ -0.13
CCS-204ENST00000526066 A8MXK9 166 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 FAM25AB3EWG3 89 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 FAM25CB3EWG5 89 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 FAM25GB3EWG6 89 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 MFNGO00587 321 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 CA11O75493 328 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 FCN3O75636 299 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 TPPPO94811 219 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 HIST1H1DP16402 221 aaKnown RBP14.24□□□□□ -0.13
CCS-204ENST00000526066 S100A5P33763 92 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 GRK1Q15835 563 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 ESCO2Q56NI9 601 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 NKAPLQ5M9Q1 402 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 WDR25Q64LD2 544 aaPredicted RBP14.24□□□□□ -0.13
CCS-204ENST00000526066 LINC00299Q6ZSB3 139 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 C6orf201Q7Z4U5 140 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 C22orf15Q8WYQ4 148 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 ARHGAP5-AS1Q96IT6 56 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 SULT4A1Q9BR01 284 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 PECRQ9BY49 303 aa14.24□□□□□ -0.13
CCS-204ENST00000526066 ZMAT3Q9HA38 289 aaKnown RBP14.24□□□□□ -0.13
CCS-204ENST00000526066 SERPINE3A8MV23 424 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 HSPB6O14558 160 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 GSTP1P09211 210 aaKnown RBP14.23□□□□□ -0.13
CCS-204ENST00000526066 HKR1P10072 659 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 ERP29P30040 261 aaKnown RBP14.23□□□□□ -0.13
CCS-204ENST00000526066 TNFSF8P32971 234 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 TALDO1P37837 337 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 MNDAP41218 407 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 TMEM69Q5SWH9 247 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 GDPD3Q7L5L3 318 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 ZDHHC22Q8N966 263 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 OR4M1Q8NGD0 313 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 OR6Q1Q8NGQ2 317 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 NEK7Q8TDX7 302 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 ST8SIA4Q92187 359 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 SSBP3Q9BWW4 388 aaPredicted RBP14.23□□□□□ -0.13
CCS-204ENST00000526066 CHST6Q9GZX3 395 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 NCOR1P1Q9H4R4 102 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 ESM1Q9NQ30 184 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 RABL2AQ9UBK7 228 aaPredicted RBP14.23□□□□□ -0.13
CCS-204ENST00000526066 EXTL2Q9UBQ6 330 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 RABL2BQ9UNT1 228 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 KCNK7Q9Y2U2 307 aa14.23□□□□□ -0.13
CCS-204ENST00000526066 TRAV18A0A075B6X5 111 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 FUOMA2VDF0 154 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 ECDO95905 644 aaPredicted RBP14.22□□□□□ -0.13
CCS-204ENST00000526066 NDUFB7P17568 137 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 SEC61A1P61619 476 aaKnown RBP14.22□□□□□ -0.13
CCS-204ENST00000526066 GNB2P62879 340 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 ZNF260Q3ZCT1 412 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 CDNFQ49AH0 187 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 PDLIM3Q53GG5 364 aaPredicted RBP14.22□□□□□ -0.13
CCS-204ENST00000526066 SLC35E4Q6ICL7 350 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 CNIH2Q6PI25 160 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 BRICD5Q6PL45 260 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 BAIAP2L2Q6UXY1 529 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 GAPTQ8N292 157 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 COQ2Q96H96 371 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 DIRAS2Q96HU8 199 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 FAAP24Q9BTP7 215 aa14.22□□□□□ -0.13
CCS-204ENST00000526066 TRBV23-1A0A0A0MS06 115 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 UBE2QL1A1L167 161 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 POM121CA8CG34 1229 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 FOXH1O75593 365 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 MELTFP08582 738 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 GNB3P16520 340 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 P2RX3P56373 397 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 TAS2R20P59543 309 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 LCN2P80188 198 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 ATXN7L3Q14CW9 347 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms