RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 TIMM9Q9Y5J7 89 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 TRAPPC1Q9Y5R8 145 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 TRAV34A0A0B4J273 112 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 IFNL4K9M1U5 179 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 HS3ST1O14792 307 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 PHF1O43189 567 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 CXCL10P02778 98 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 BCL2P10415 239 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 CD1BP29016 333 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 PAX9P55771 341 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 TPPP2P59282 170 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 Q0VG73 95 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 MMDQ15546 238 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 OR8B8Q15620 311 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 MCEMP1Q8IX19 187 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF738Q8NE65 137 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 OR5D18Q8NGL1 313 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 CMTM2Q8TAZ6 248 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 MOB3AQ96BX8 217 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 BTF3L4Q96K17 158 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 ADOQ96SZ5 270 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 PLEKHF2Q9H8W4 249 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 NXT1Q9UKK6 140 aaKnown RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 COA3Q9Y2R0 106 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 A0A0U1RQK1 487 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 A0A1W2PNV4 684 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 IGSF23A1L1A6 192 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF320A2RRD8 509 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 HLA-HP01893 362 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 CD33P20138 364 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 TSPO2Q5TGU0 170 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 LILRA6Q6PI73 481 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 CA13Q8N1Q1 262 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 NUDT10Q8NFP7 164 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 OR10S1Q8NGN2 331 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 KCNK17Q96T54 332 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF665Q9H7R5 613 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 MRPS2Q9Y399 296 aaKnown RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 TNRC6AQ8NDV7 1962 aaKnown RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 FREM3P0C091 2139 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 A0A1W2PP11 408 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 SSSCA1O60232 199 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 CD55P08174 381 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 VIPR2P41587 438 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 FGF8P55075 233 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 TAS2R30P59541 319 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 SUMO1P63165 101 aaKnown RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 HIST3H3Q16695 136 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 Q6ZN92 141 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 OR52M1Q8NGK5 317 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 DYRK2Q92630 601 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 DAZLQ92904 295 aaKnown RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 RERGQ96A58 199 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-213ENST00000523488 ELSPBP1Q96BH3 223 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 IL36GQ9NZH8 169 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 PPIAL4AQ9Y536 164 aa7.25□□□□□ -1.25
CSMD1-213ENST00000523488 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 SLC31A1O15431 190 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 CCL25O15444 150 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 HRASP01112 189 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 SERPINA7P05543 415 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 RPL27P61353 136 aaKnown RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 GNB2P62879 340 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 PAFAH1B2P68402 229 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 ARG2P78540 354 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 RPL19P84098 196 aaKnown RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 TESK1Q15569 626 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 ACKR1Q16570 336 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 TMPRSS7Q7RTY8 843 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 ADAT3Q96EY9 351 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 FAM71F1Q96KD3 344 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 SPIN2AQ99865 258 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 SPIN2BQ9BPZ2 258 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 GLRX2Q9NS18 164 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 PLEKHJ1Q9NW61 149 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 UBE2J1Q9Y385 318 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 MRPS16Q9Y3D3 137 aaKnown RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 LAMA2P24043 3122 aaKnown RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 PRSS47A8MTI9 375 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 MPZL1O95297 269 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 DYNLT3P51808 116 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 METAP1P53582 386 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 OR1D5P58170 312 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 TLE1Q04724 770 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 DGAT2L6Q6ZPD8 337 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 OR4C3Q8NH37 302 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 IRF7Q92985 503 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 SLC46A1Q96NT5 459 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 ALKBH3Q96Q83 286 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 PECRQ9BY49 303 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 C1RLQ9NZP8 487 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 ZDBF2Q9HCK1 2354 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 AHCTF1Q8WYP5 2266 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 LOC102724200A0A096LPH7 203 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF814B7Z6K7 855 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 KBTBD11O94819 623 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 HOXB2P14652 356 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 CTLA4P16410 223 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 MLF1P58340 268 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 HERV-K104P61576 105 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms