RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MAB21L2Q9Y586 359 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 TMEM30CPA0ZSE6 113 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 MEIS3P1A6NDR6 274 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 TK1P04183 234 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 GIFP27352 417 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 PDLIM4P50479 330 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 TAS2R19P59542 299 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 ASAH1Q13510 395 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 GRK1Q15835 563 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 ACTBL2Q562R1 376 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF57Q68EA5 555 aaPredicted RBP10.88□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF880Q6PDB4 577 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 BPIFB2Q8N4F0 458 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 SPICQ8N5J4 248 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 TMEM229BQ8NBD8 167 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 OR5D13Q8NGL4 314 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 MRPL30Q8TCC3 161 aaKnown RBP10.88□□□□□ -0.67
CPNE3-205ENST00000522240 CCL13Q99616 98 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 NCOR1P1Q9H4R4 102 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 CHMP1AQ9HD42 196 aaPredicted RBP10.88□□□□□ -0.67
CPNE3-205ENST00000522240 TBC1D24Q9ULP9 559 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 ITPR3Q14573 2671 aa10.88□□□□□ -0.67
CPNE3-205ENST00000522240 ZFHX3Q15911 3703 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 FUOMA2VDF0 154 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 TMPRSS2O15393 492 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 PPIHO43447 177 aaKnown RBP10.87□□□□□ -0.67
CPNE3-205ENST00000522240 ADAM20O43506 726 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 TFF1P04155 84 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 CD74P04233 296 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 ERP29P30040 261 aaKnown RBP10.87□□□□□ -0.67
CPNE3-205ENST00000522240 FAUP35544 74 aaKnown RBP10.87□□□□□ -0.67
CPNE3-205ENST00000522240 GPR6P46095 362 aaPredicted RBP10.87□□□□□ -0.67
CPNE3-205ENST00000522240 GVQW1Q8N7I0 195 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 FAM216BQ8N7L0 139 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 ZNRF1Q8ND25 227 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 TMEM185AQ8NFB2 350 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 BEST4Q8NFU0 473 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 SNAPC3Q92966 411 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 COQ2Q96H96 371 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 COX4I2Q96KJ9 171 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 LIME1Q9H400 295 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF286AQ9HBT8 521 aa10.87□□□□□ -0.67
CPNE3-205ENST00000522240 MBNL3Q9NUK0 354 aaKnown RBP10.87□□□□□ -0.67
CPNE3-205ENST00000522240 BEX4Q9NWD9 120 aaPredicted RBP10.87□□□□□ -0.67
CPNE3-205ENST00000522240 KIR2DS1A0A191URI9 304 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 NAP1L6A6NFF2 107 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 CENPXA8MT69 81 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 CEACAM18A8MTB9 384 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF736B4DX44 427 aaPredicted RBP10.86□□□□□ -0.67
CPNE3-205ENST00000522240 NDUFS8O00217 210 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 MT-ND4P03905 459 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 AKAIN1P0CW23 69 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 SELLP14151 372 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 KIR2DS4P43632 304 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 ATP5J2P56134 94 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 P2RX3P56373 397 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 TAS2R46P59540 309 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 HLA-DRB3P79483 266 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 KIR2DS1Q14954 304 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 LRRC10Q5BKY1 277 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 KRBOX4Q5JUW0 171 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 TRAT1Q6PIZ9 186 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 Q6ZPA2 131 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 GDPD3Q7L5L3 318 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF525Q8N782 197 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 Q9N2K0 584 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 CTSZQ9UBR2 303 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 MIOXQ9UGB7 285 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 CSMD2Q7Z408 3487 aa10.86□□□□□ -0.67
CPNE3-205ENST00000522240 NF1P21359 2839 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 A0A1B0GW55 424 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 F5H0A9 414 aaPredicted RBP10.85□□□□□ -0.67
CPNE3-205ENST00000522240 PLA2G10O15496 165 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 LYRM1O43325 122 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 NDUFB3O43676 98 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 SSX4O60224 188 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 PTTG1O95997 202 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 CD3DP04234 171 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 DUX4L2P0CJ85 424 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 DUX4L3P0CJ86 424 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 DUX4L4P0CJ87 422 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 DUX4L5P0CJ88 424 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 DUX4L6P0CJ89 424 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 DUX4L7P0CJ90 424 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 RPS2P15880 293 aaKnown RBP10.85□□□□□ -0.67
CPNE3-205ENST00000522240 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
CPNE3-205ENST00000522240 KRTAP10-9P60411 292 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 AESQ08117 197 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 MEF2DQ14814 521 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 CARTPTQ16568 116 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 RGS21Q2M5E4 152 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 RNASE10Q5GAN6 216 aaKnown RBP10.85□□□□□ -0.67
CPNE3-205ENST00000522240 VAX1Q5SQQ9 334 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 AVPI1Q5T686 147 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 C6orf183Q5T699 404 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 STEAP1BQ6NZ63 245 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 DUX4L9Q6RFH8 374 aaPredicted RBP10.85□□□□□ -0.67
CPNE3-205ENST00000522240 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 NLRC3Q7RTR2 1065 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms