RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 GSTP1P09211 210 aaKnown RBP12.65□□□□□ -0.38
LSM1-203ENST00000520755 S100A5P33763 92 aa12.65□□□□□ -0.38
LSM1-203ENST00000520755 EDDM3AQ14507 147 aa12.65□□□□□ -0.38
LSM1-203ENST00000520755 CDNFQ49AH0 187 aa12.65□□□□□ -0.38
LSM1-203ENST00000520755 CD276Q5ZPR3 534 aa12.65□□□□□ -0.38
LSM1-203ENST00000520755 FAHD2BQ6P2I3 314 aaPredicted RBP12.65□□□□□ -0.38
LSM1-203ENST00000520755 OR4M2Q8NGB6 313 aa12.65□□□□□ -0.38
LSM1-203ENST00000520755 NUDCD2Q8WVJ2 157 aa12.65□□□□□ -0.38
LSM1-203ENST00000520755 FAHD2AQ96GK7 314 aa12.65□□□□□ -0.38
LSM1-203ENST00000520755 ABHD1Q96SE0 405 aa12.65□□□□□ -0.38
LSM1-203ENST00000520755 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.38
LSM1-203ENST00000520755 WNK2Q9Y3S1 2297 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 IGHV2-70DA0A0C4DH43 119 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 MEIOCA2RUB1 952 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 ECDO95905 644 aaPredicted RBP12.64□□□□□ -0.39
LSM1-203ENST00000520755 NAPSAO96009 420 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 MELTFP08582 738 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 GLIPR1P48060 266 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 KCNJ3P48549 501 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 GUCA2AQ02747 115 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 AESQ08117 197 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 ZNF497Q6ZNH5 498 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 MRPL30Q8TCC3 161 aaKnown RBP12.64□□□□□ -0.39
LSM1-203ENST00000520755 NEK7Q8TDX7 302 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 PHF21AQ96BD5 680 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 C19orf12Q9NSK7 152 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 ING3Q9NXR8 418 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 ETAA1Q9NY74 926 aa12.64□□□□□ -0.39
LSM1-203ENST00000520755 ANK3Q12955 4377 aaKnown RBP12.63□□□□□ -0.39
LSM1-203ENST00000520755 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 H3BUI4 141 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 GPR37O15354 613 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 ENSAO43768 121 aaKnown RBP12.63□□□□□ -0.39
LSM1-203ENST00000520755 TALDO1P37837 337 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 P2RX3P56373 397 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 PAX2Q02962 417 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 RBM39Q14498 530 aaKnown RBP12.63□□□□□ -0.39
LSM1-203ENST00000520755 CR1LQ2VPA4 569 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 HACD4Q5VWC8 232 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 BTNL3Q6UXE8 466 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 LINC00299Q6ZSB3 139 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 SNX29P2Q8IUI4 249 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 PPP1R35Q8TAP8 253 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 DACT3Q96B18 629 aaPredicted RBP12.63□□□□□ -0.39
LSM1-203ENST00000520755 DCTN5Q9BTE1 182 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 KIF25Q9UIL4 384 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
LSM1-203ENST00000520755 MRPS7Q9Y2R9 242 aaKnown RBP12.63□□□□□ -0.39
LSM1-203ENST00000520755 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 TLN2Q9Y4G6 2542 aa12.63□□□□□ -0.39
LSM1-203ENST00000520755 TRAV39A0A0B4J263 110 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 TMEM30CPA0ZSE6 113 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 MEX3AA1L020 520 aaKnown RBP12.62□□□□□ -0.39
LSM1-203ENST00000520755 FABP12A6NFH5 140 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 INAFM1C9JVW0 142 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 CA11O75493 328 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 GATA3P23771 443 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 ERP29P30040 261 aaKnown RBP12.62□□□□□ -0.39
LSM1-203ENST00000520755 EDDM3BP56851 147 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 IL18Q14116 193 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 PNLIPRP3Q17RR3 467 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 KRBOX4Q5JUW0 171 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 SLC35E4Q6ICL7 350 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 BAIAP2L2Q6UXY1 529 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 GDPD3Q7L5L3 318 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 LURAP1LQ8IV03 231 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
LSM1-203ENST00000520755 C7orf69Q9H7B7 122 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
LSM1-203ENST00000520755 KIR2DS1A0A191URI9 304 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 A0A1W2PQ09 198 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 ODAMA1E959 279 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 J3QLI3 93 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 TPPPO94811 219 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 MT-ND4P03905 459 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 FCGR3AP08637 254 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 DGCR2P98153 550 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 LSAMPQ13449 338 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 ZNF273Q14593 569 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 ARL6IP1Q15041 203 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 C11orf91Q3C1V1 193 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 RNASE12Q5GAN4 147 aaKnown RBP12.61□□□□□ -0.39
LSM1-203ENST00000520755 FAM120AOSQ5T036 256 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 PYHIN1Q6K0P9 492 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 ZNF880Q6PDB4 577 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 FAM131AQ6UXB0 335 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 IL17RELQ6ZVW7 336 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 C5orf24Q7Z6I8 188 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 FAM185AQ8N0U4 392 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 OR13A1Q8NGR1 328 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 OR4K15Q8NH41 348 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 C8orf46Q8TAG6 207 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 GPX8Q8TED1 209 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 SDHCQ99643 169 aaPredicted RBP12.61□□□□□ -0.39
LSM1-203ENST00000520755 TMPRSS13Q9BYE2 586 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 SRRQ9GZT4 340 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 ANAPC10Q9UM13 185 aa12.61□□□□□ -0.39
LSM1-203ENST00000520755 IGKV1D-8A0A087WSZ0 117 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms