RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 WDYHV1Q96HA8 205 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 NKX6-2Q9C056 277 aaPredicted RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 OPN3Q9H1Y3 402 aaPredicted RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 SAV1Q9H4B6 383 aaPredicted RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 RHOFQ9HBH0 211 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 OTOGLQ3ZCN5 2332 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 CRYM-AS1A6NIL9 109 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 MKRN2OSH3BPM6 223 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 NFYBP25208 207 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 CEBPDP49716 269 aaPredicted RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 HIST1H3AP68431 136 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 ZNF816Q0VGE8 651 aaPredicted RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 HIST2H3PS2Q5TEC6 136 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 DNM1P46Q6ZS02 220 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 HIST2H3AQ71DI3 136 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 HSD17B13Q7Z5P4 300 aaPredicted RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 MRGPRDQ8TDS7 321 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 SFT2D1Q8WV19 159 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 GALMQ96C23 342 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 POM121L2Q96KW2 1035 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 SPRR3Q9UBC9 169 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 PUS1Q9Y606 427 aaKnown RBP eCLIP8.72□□□□□ -1.01
MCF2-209ENST00000520602 SPINT2O43291 252 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 RPS16P62249 146 aaKnown RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 SSX9Q7RTT3 188 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 Q8IYB0 196 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 GLRX2Q9NS18 164 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 RYDENQ9NUL5 291 aaKnown RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 RNF212BA8MTL3 300 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 F8VVB4 439 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 F8VWA3 439 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 GALR2O43603 387 aaPredicted RBP8.71□□□□□ -1.01
MCF2-209ENST00000520602 OR13C7P0DN81 318 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 NHLH2Q02577 135 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 MSMO1Q15800 293 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 VWA1Q6PCB0 445 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 WFDC8Q8IUA0 241 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 OR2C3Q8N628 320 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 DMBX1Q8NFW5 382 aa8.71□□□□□ -1.01
MCF2-209ENST00000520602 MARS2Q96GW9 593 aaKnown RBP8.71□□□□□ -1.01
MCF2-209ENST00000520602 PRR14LQ5THK1 2151 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 ATG12O94817 140 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 COX5BP10606 129 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 TNFSF4P23510 183 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 DHODHQ02127 395 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 RNFT1Q5M7Z0 435 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 FOXL2NBQ6ZUU3 175 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 MOB3AQ96BX8 217 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 TREM2Q9NZC2 230 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 DIDO1Q9BTC0 2240 aaKnown RBP8.71□□□□□ -1.02
MCF2-209ENST00000520602 IGKV3D-15A0A087WSY6 115 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 TMEM30CPA0ZSE6 113 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 G3V3Q6 166 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 H0YIZ8 118 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 PRRG2O14669 202 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 MBPP02686 304 aaPredicted RBP8.71□□□□□ -1.02
MCF2-209ENST00000520602 AKR1C3P42330 323 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 ALDH3B1P43353 468 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 INO80CQ6PI98 192 aaPredicted RBP8.71□□□□□ -1.02
MCF2-209ENST00000520602 ZNF610Q8N9Z0 462 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 OR52M1Q8NGK5 317 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 OR5C1Q8NGR4 320 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 LRRC29Q8WV35 223 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 WNT2BQ93097 391 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 FN3KRPQ9HA64 309 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 DLL3Q9NYJ7 618 aa8.71□□□□□ -1.02
MCF2-209ENST00000520602 LRP5LA4QPB2 252 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 CA11O75493 328 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 SUPT4H1P63272 117 aaKnown RBP8.7□□□□□ -1.02
MCF2-209ENST00000520602 AESQ08117 197 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 SMIM21Q3B7S5 101 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 THNSL2Q86YJ6 484 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 SCCPDHQ8NBX0 429 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 CACNG5Q9UF02 275 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 MFSD2BA6NFX1 497 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 HAND1O96004 215 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 CD37P11049 281 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 NAT1P18440 290 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 HOXD11P31277 338 aaPredicted RBP8.7□□□□□ -1.02
MCF2-209ENST00000520602 F2RL1P55085 397 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 PJVKQ0ZLH3 352 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 IZUMO4Q1ZYL8 232 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 MIDNQ504T8 468 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 POC1AQ8NBT0 407 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 OR5P3Q8WZ94 311 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 BCL2L2Q92843 193 aaPredicted RBP8.7□□□□□ -1.02
MCF2-209ENST00000520602 RNF126Q9BV68 326 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 ENY2Q9NPA8 101 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 PRELID1Q9Y255 219 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 OR2W1Q9Y3N9 320 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 A0A1W2PNU3 283 aaPredicted RBP8.7□□□□□ -1.02
MCF2-209ENST00000520602 CHST1O43916 411 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 HEXAP06865 529 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 PMELP40967 661 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 ERVK-16P61578 105 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 HAGHQ16775 308 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 NSUN5P2Q63ZY6 315 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 TP53RKQ96S44 253 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 Q9N2K0 584 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms